Guide to the Human Genome
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Name: FBXO28 Sequence: fasta or formatted (179aa) NCBI GI: 209870086
Description:

F-box protein 28 isoform b

Referenced in:

Cullins and SCF Complexes

Other entries for this name:
alt prot [368aa] F-box protein 28 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         18           4
 C cysteine            2.8          5           2
 D aspartate           3.9          7           1
 E glutamate           5.6         10           2
 F phenylalanine       2.8          5           1
 G glycine             6.1         11           4
 H histidine           2.2          4           1
 I isoleucine          3.4          6           1
 K lysine              3.4          6           1
 L leucine            11.7         21           2
 M methionine          3.9          7           1
 N asparagine          4.5          8           2
 P proline             8.4         15           4
 Q glutamine           8.9         16           1
 R arginine            7.3         13           2
 S serine              6.7         12           2
 T threonine           2.2          4           1
 V valine              4.5          8           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.7          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box protein 28 isoform b 
FBXO28                0.961   F-box protein 28 isoform a 
CUX1                  0.039   cut-like homeobox 1 isoform a 
XYLT1                 0.039   xylosyltransferase I 
LOC100293268          0.039   PREDICTED: hypothetical protein 
LMO2                  0.039   LIM domain only 2 isoform 1 
MARCH11               0.036   membrane-associated ring finger (C3HC4) 11 
SFRS15                0.036   splicing factor, arginine/serine-rich 15 isoform 3 ...
SFRS15                0.036   splicing factor, arginine/serine-rich 15 isoform 2 ...
SFRS15                0.036   splicing factor, arginine/serine-rich 15 isoform 1 [...
PRRT2                 0.036   proline-rich transmembrane protein 2 
MEX3D                 0.033   ring finger and KH domain containing 1 
PACS1                 0.033   phosphofurin acidic cluster sorting protein 1 
ZIC5                  0.033   zinc finger protein of the cerebellum 5 
MYST3                 0.030   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.030   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.030   MYST histone acetyltransferase (monocytic leukemia)...
FBXO42                0.030   F-box protein 42 
SOX9                  0.030   transcription factor SOX9 
WASF1                 0.030   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.030   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.030   Wiskott-Aldrich syndrome protein family member 1 [Ho...
WASF1                 0.030   Wiskott-Aldrich syndrome protein family member 1 [Hom...
HTT                   0.030   huntingtin 
ZNF469                0.030   zinc finger protein 469 
PELP1                 0.030   proline, glutamic acid and leucine rich protein 1 [...
MAPK8IP2              0.030   mitogen-activated protein kinase 8 interacting protei...
MAPK8IP2              0.030   mitogen-activated protein kinase 8 interacting protei...
HCN2                  0.030   hyperpolarization activated cyclic nucleotide-gated...
FMNL2                 0.030   formin-like 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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