Guide to the Human Genome
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Name: MAPK8 Sequence: fasta or formatted (384aa) NCBI GI: 20986519
Description:

mitogen-activated protein kinase 8 isoform JNK1 beta1

Referenced in:

MAP Kinase Pathways

Other entries for this name:
alt prot [427aa] mitogen-activated protein kinase 8 isoform JNK1 beta2
alt prot [427aa] mitogen-activated protein kinase 8 isoform JNK1 alpha2
alt prot [384aa] mitogen-activated protein kinase 8 isoform JNK1 alpha1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         21           2
 C cysteine            1.8          7           1
 D aspartate           5.5         21           1
 E glutamate           7.0         27           2
 F phenylalanine       3.1         12           1
 G glycine             5.2         20           2
 H histidine           2.6         10           1
 I isoleucine          7.0         27           2
 K lysine              7.6         29           2
 L leucine             9.1         35           2
 M methionine          3.9         15           2
 N asparagine          4.2         16           2
 P proline             5.5         21           3
 Q glutamine           4.9         19           2
 R arginine            4.9         19           1
 S serine              5.5         21           1
 T threonine           3.9         15           1
 V valine              7.3         28           2
 W tryptophan          1.0          4           1
 Y tyrosine            4.4         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitogen-activated protein kinase 8 isoform JNK1 beta... 
MAPK8                 0.988   mitogen-activated protein kinase 8 isoform JNK1 beta...
MAPK8                 0.980   mitogen-activated protein kinase 8 isoform JNK1 alpha...
MAPK8                 0.968   mitogen-activated protein kinase 8 isoform JNK1 alph...
MAPK10                0.925   mitogen-activated protein kinase 10 isoform 1 
MAPK10                0.913   mitogen-activated protein kinase 10 isoform 2 
MAPK10                0.913   mitogen-activated protein kinase 10 isoform 3 
MAPK9                 0.848   mitogen-activated protein kinase 9 isoform JNK2 alph...
MAPK9                 0.845   mitogen-activated protein kinase 9 isoform JNK2 alph...
MAPK9                 0.838   mitogen-activated protein kinase 9 isoform JNK2 beta...
MAPK9                 0.836   mitogen-activated protein kinase 9 isoform JNK2 beta...
MAPK10                0.662   mitogen-activated protein kinase 10 isoform 4 
MAPK9                 0.521   mitogen-activated protein kinase 9 isoform JNK2 gam...
MAPK11                0.409   mitogen-activated protein kinase 11 
MAPK14                0.395   mitogen-activated protein kinase 14 isoform 2 
MAPK13                0.391   mitogen-activated protein kinase 13 
MAPK14                0.385   mitogen-activated protein kinase 14 isoform 1 
MAPK12                0.380   mitogen-activated protein kinase 12 
MAPK14                0.339   mitogen-activated protein kinase 14 isoform 3 
MAPK14                0.332   mitogen-activated protein kinase 14 isoform 4 
MAPK1                 0.306   mitogen-activated protein kinase 1 
MAPK1                 0.306   mitogen-activated protein kinase 1 
MAPK3                 0.303   mitogen-activated protein kinase 3 isoform 1 
MAPK3                 0.297   mitogen-activated protein kinase 3 isoform 2 
MAPK7                 0.290   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.290   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.290   mitogen-activated protein kinase 7 isoform 1 
MAPK3                 0.237   mitogen-activated protein kinase 3 isoform 3 
NLK                   0.236   nemo like kinase 
MAPK15                0.234   mitogen-activated protein kinase 15 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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