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Search of human proteins with 207028494
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|207028494 L-lactate dehydrogenase A isoform 2 [Homo sapiens]
(274 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|207028494 L-lactate dehydrogenase A isoform 2 [Homo sapiens] 548 e-156
gi|5031857 L-lactate dehydrogenase A isoform 1 [Homo sapiens] 399 e-111
gi|9257228 L-lactate dehydrogenase C [Homo sapiens] 333 1e-91
gi|4504973 L-lactate dehydrogenase C [Homo sapiens] 333 1e-91
gi|221136809 lactate dehydrogenase A-like 6A [Homo sapiens] 323 8e-89
gi|47059044 lactate dehydrogenase A-like 6A [Homo sapiens] 323 8e-89
gi|15082234 lactate dehydrogenase A-like 6B [Homo sapiens] 323 1e-88
gi|4557032 L-lactate dehydrogenase B [Homo sapiens] 312 2e-85
gi|103472011 ubiquitin-conjugating enzyme E2-like isoform a [Hom... 158 4e-39
gi|103472015 ubiquitin-conjugating enzyme E2-like isoform b [Hom... 81 1e-15
gi|9910280 UDP-glucose ceramide glucosyltransferase-like 1 [Homo... 32 0.78
gi|24797065 zinc finger protein 212 [Homo sapiens] 30 2.3
gi|133908616 glycerol-3-phosphate dehydrogenase 2, mitochondrial... 30 3.0
gi|133908614 glycerol-3-phosphate dehydrogenase 2, mitochondrial... 30 3.0
gi|194097398 protein tyrosine phosphatase, receptor type, G prec... 29 3.9
gi|73623028 carnitine palmitoyltransferase 1A liver isoform 2 [H... 28 8.6
gi|73623030 carnitine palmitoyltransferase 1A liver isoform 1 [H... 28 8.6
>gi|207028494 L-lactate dehydrogenase A isoform 2 [Homo sapiens]
Length = 274
Score = 548 bits (1412), Expect = e-156
Identities = 274/274 (100%), Positives = 274/274 (100%)
Query: 1 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG 60
MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG
Sbjct: 1 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG 60
Query: 61 EMMDLQHGSLFLRTPKIVSGKVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERL 120
EMMDLQHGSLFLRTPKIVSGKVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERL
Sbjct: 61 EMMDLQHGSLFLRTPKIVSGKVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERL 120
Query: 121 GVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESA 180
GVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESA
Sbjct: 121 GVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESA 180
Query: 181 YEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQN 240
YEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQN
Sbjct: 181 YEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQN 240
Query: 241 GISDLVKVTLTSEEEARLKKSADTLWGIQKELQF 274
GISDLVKVTLTSEEEARLKKSADTLWGIQKELQF
Sbjct: 241 GISDLVKVTLTSEEEARLKKSADTLWGIQKELQF 274
>gi|5031857 L-lactate dehydrogenase A isoform 1 [Homo sapiens]
Length = 332
Score = 399 bits (1024), Expect = e-111
Identities = 196/198 (98%), Positives = 196/198 (98%)
Query: 77 IVSGKVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHG 136
IVS VDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHG
Sbjct: 135 IVSNPVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHG 194
Query: 137 DSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYEVIKLKGYTSWAIGL 196
DSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYEVIKLKGYTSWAIGL
Sbjct: 195 DSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYEVIKLKGYTSWAIGL 254
Query: 197 SVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGISDLVKVTLTSEEEA 256
SVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGISDLVKVTLTSEEEA
Sbjct: 255 SVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGISDLVKVTLTSEEEA 314
Query: 257 RLKKSADTLWGIQKELQF 274
RLKKSADTLWGIQKELQF
Sbjct: 315 RLKKSADTLWGIQKELQF 332
>gi|9257228 L-lactate dehydrogenase C [Homo sapiens]
Length = 332
Score = 333 bits (853), Expect = 1e-91
Identities = 151/198 (76%), Positives = 177/198 (89%)
Query: 77 IVSGKVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHG 136
+VS VDILTY+ WKISG P RVIGSGCNLDSARFRYL+GE+LGVHP SCHGW++GEHG
Sbjct: 135 VVSNPVDILTYIVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLGVHPTSCHGWIIGEHG 194
Query: 137 DSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYEVIKLKGYTSWAIGL 196
DSSVP+WSG+NVAGV+LKTL P LGTD DKE WK +HKQV++SAYE+IKLKGYTSWAIGL
Sbjct: 195 DSSVPLWSGVNVAGVALKTLDPKLGTDSDKEHWKNIHKQVIQSAYEIIKLKGYTSWAIGL 254
Query: 197 SVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGISDLVKVTLTSEEEA 256
SV DL SI+KNLRRVHPVSTM+KGLYGIK+++FLS+PC+LG+NG+SD+VK+ L SEEEA
Sbjct: 255 SVMDLVGSILKNLRRVHPVSTMVKGLYGIKEELFLSIPCVLGRNGVSDVVKINLNSEEEA 314
Query: 257 RLKKSADTLWGIQKELQF 274
KKSA+TLW IQK+L F
Sbjct: 315 LFKKSAETLWNIQKDLIF 332
Score = 117 bits (294), Expect = 8e-27
Identities = 59/81 (72%), Positives = 69/81 (85%)
Query: 1 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG 60
M+T+K+QLI L+++++ Q KIT+VG GAVGMACAISIL+KDLADELALVDV DKLKG
Sbjct: 1 MSTVKEQLIEKLIEDDENSQCKITIVGTGAVGMACAISILLKDLADELALVDVALDKLKG 60
Query: 61 EMMDLQHGSLFLRTPKIVSGK 81
EMMDLQHGSLF T KI SGK
Sbjct: 61 EMMDLQHGSLFFSTSKITSGK 81
>gi|4504973 L-lactate dehydrogenase C [Homo sapiens]
Length = 332
Score = 333 bits (853), Expect = 1e-91
Identities = 151/198 (76%), Positives = 177/198 (89%)
Query: 77 IVSGKVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHG 136
+VS VDILTY+ WKISG P RVIGSGCNLDSARFRYL+GE+LGVHP SCHGW++GEHG
Sbjct: 135 VVSNPVDILTYIVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLGVHPTSCHGWIIGEHG 194
Query: 137 DSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYEVIKLKGYTSWAIGL 196
DSSVP+WSG+NVAGV+LKTL P LGTD DKE WK +HKQV++SAYE+IKLKGYTSWAIGL
Sbjct: 195 DSSVPLWSGVNVAGVALKTLDPKLGTDSDKEHWKNIHKQVIQSAYEIIKLKGYTSWAIGL 254
Query: 197 SVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGISDLVKVTLTSEEEA 256
SV DL SI+KNLRRVHPVSTM+KGLYGIK+++FLS+PC+LG+NG+SD+VK+ L SEEEA
Sbjct: 255 SVMDLVGSILKNLRRVHPVSTMVKGLYGIKEELFLSIPCVLGRNGVSDVVKINLNSEEEA 314
Query: 257 RLKKSADTLWGIQKELQF 274
KKSA+TLW IQK+L F
Sbjct: 315 LFKKSAETLWNIQKDLIF 332
Score = 117 bits (294), Expect = 8e-27
Identities = 59/81 (72%), Positives = 69/81 (85%)
Query: 1 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG 60
M+T+K+QLI L+++++ Q KIT+VG GAVGMACAISIL+KDLADELALVDV DKLKG
Sbjct: 1 MSTVKEQLIEKLIEDDENSQCKITIVGTGAVGMACAISILLKDLADELALVDVALDKLKG 60
Query: 61 EMMDLQHGSLFLRTPKIVSGK 81
EMMDLQHGSLF T KI SGK
Sbjct: 61 EMMDLQHGSLFFSTSKITSGK 81
>gi|221136809 lactate dehydrogenase A-like 6A [Homo sapiens]
Length = 332
Score = 323 bits (829), Expect = 8e-89
Identities = 150/197 (76%), Positives = 176/197 (89%)
Query: 77 IVSGKVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHG 136
IV+ VDILTYVAWK+SGFPKNRVIGSGCNLDSARFRY +G+RLG+H SCHG +LGEHG
Sbjct: 135 IVTNPVDILTYVAWKLSGFPKNRVIGSGCNLDSARFRYFIGQRLGIHSESCHGLILGEHG 194
Query: 137 DSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYEVIKLKGYTSWAIGL 196
DSSVPVWSG+N+AGV LK L+PD+GTDKD EQW+ VHK+V+ S YE++K+KGYTSW I L
Sbjct: 195 DSSVPVWSGVNIAGVPLKDLNPDIGTDKDPEQWENVHKKVISSGYEMVKMKGYTSWGISL 254
Query: 197 SVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGISDLVKVTLTSEEEA 256
SVADL ESI+KNLRRVHPVST+ KGLYGI +D+FLSVPCILG+NGI+DL+KV LT EEEA
Sbjct: 255 SVADLTESILKNLRRVHPVSTLSKGLYGINEDIFLSVPCILGENGITDLIKVKLTLEEEA 314
Query: 257 RLKKSADTLWGIQKELQ 273
L+KSA+TLW IQKEL+
Sbjct: 315 CLQKSAETLWEIQKELK 331
Score = 104 bits (260), Expect = 7e-23
Identities = 53/86 (61%), Positives = 66/86 (76%)
Query: 1 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG 60
MAT+K +LI N +EE NKI++VG G+VG+ACAISIL+K L+DEL LVDV E KLKG
Sbjct: 1 MATIKSELIKNFAEEEAIHHNKISIVGTGSVGVACAISILLKGLSDELVLVDVDEGKLKG 60
Query: 61 EMMDLQHGSLFLRTPKIVSGKVDILT 86
E MDLQHGS F++ P IVS K ++T
Sbjct: 61 ETMDLQHGSPFMKMPNIVSSKDYLVT 86
>gi|47059044 lactate dehydrogenase A-like 6A [Homo sapiens]
Length = 332
Score = 323 bits (829), Expect = 8e-89
Identities = 150/197 (76%), Positives = 176/197 (89%)
Query: 77 IVSGKVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHG 136
IV+ VDILTYVAWK+SGFPKNRVIGSGCNLDSARFRY +G+RLG+H SCHG +LGEHG
Sbjct: 135 IVTNPVDILTYVAWKLSGFPKNRVIGSGCNLDSARFRYFIGQRLGIHSESCHGLILGEHG 194
Query: 137 DSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYEVIKLKGYTSWAIGL 196
DSSVPVWSG+N+AGV LK L+PD+GTDKD EQW+ VHK+V+ S YE++K+KGYTSW I L
Sbjct: 195 DSSVPVWSGVNIAGVPLKDLNPDIGTDKDPEQWENVHKKVISSGYEMVKMKGYTSWGISL 254
Query: 197 SVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGISDLVKVTLTSEEEA 256
SVADL ESI+KNLRRVHPVST+ KGLYGI +D+FLSVPCILG+NGI+DL+KV LT EEEA
Sbjct: 255 SVADLTESILKNLRRVHPVSTLSKGLYGINEDIFLSVPCILGENGITDLIKVKLTLEEEA 314
Query: 257 RLKKSADTLWGIQKELQ 273
L+KSA+TLW IQKEL+
Sbjct: 315 CLQKSAETLWEIQKELK 331
Score = 104 bits (260), Expect = 7e-23
Identities = 53/86 (61%), Positives = 66/86 (76%)
Query: 1 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG 60
MAT+K +LI N +EE NKI++VG G+VG+ACAISIL+K L+DEL LVDV E KLKG
Sbjct: 1 MATIKSELIKNFAEEEAIHHNKISIVGTGSVGVACAISILLKGLSDELVLVDVDEGKLKG 60
Query: 61 EMMDLQHGSLFLRTPKIVSGKVDILT 86
E MDLQHGS F++ P IVS K ++T
Sbjct: 61 ETMDLQHGSPFMKMPNIVSSKDYLVT 86
>gi|15082234 lactate dehydrogenase A-like 6B [Homo sapiens]
Length = 381
Score = 323 bits (828), Expect = 1e-88
Identities = 147/197 (74%), Positives = 177/197 (89%)
Query: 77 IVSGKVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHG 136
IVS VDILTYVAWK+S FPKNR+IGSGCNLD+ARFR+L+G++LG+H SCHGW+LGEHG
Sbjct: 184 IVSNPVDILTYVAWKLSAFPKNRIIGSGCNLDTARFRFLIGQKLGIHSESCHGWILGEHG 243
Query: 137 DSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYEVIKLKGYTSWAIGL 196
DSSVPVWSG+N+AGV LK L+ D+GTDKD EQWK VHK+V +AYE+IK+KGYTSWAIGL
Sbjct: 244 DSSVPVWSGVNIAGVPLKDLNSDIGTDKDPEQWKNVHKEVTATAYEIIKMKGYTSWAIGL 303
Query: 197 SVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGISDLVKVTLTSEEEA 256
SVADL ESI+KNLRR+HPVST+IKGLYGI ++VFLS+PCILG+NGI++L+K+ LT EEEA
Sbjct: 304 SVADLTESILKNLRRIHPVSTIIKGLYGIDEEVFLSIPCILGENGITNLIKIKLTPEEEA 363
Query: 257 RLKKSADTLWGIQKELQ 273
LKKSA TLW IQ +L+
Sbjct: 364 HLKKSAKTLWEIQNKLK 380
Score = 98.6 bits (244), Expect = 5e-21
Identities = 48/81 (59%), Positives = 61/81 (75%)
Query: 1 MATLKDQLIYNLLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKG 60
MAT+K +LI E+ +K++++G G+VGMACAISIL+K L+DELALVD+ EDKLKG
Sbjct: 50 MATVKSELIERFTSEKPVHHSKVSIIGTGSVGMACAISILLKGLSDELALVDLDEDKLKG 109
Query: 61 EMMDLQHGSLFLRTPKIVSGK 81
E MDLQHGS F + P IV K
Sbjct: 110 ETMDLQHGSPFTKMPNIVCSK 130
>gi|4557032 L-lactate dehydrogenase B [Homo sapiens]
Length = 334
Score = 312 bits (800), Expect = 2e-85
Identities = 143/197 (72%), Positives = 172/197 (87%)
Query: 77 IVSGKVDILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHG 136
+VS VDILTYV WK+SG PK+RVIGSGCNLDSARFRYLM E+LG+HP SCHGW+LGEHG
Sbjct: 136 VVSNPVDILTYVTWKLSGLPKHRVIGSGCNLDSARFRYLMAEKLGIHPSSCHGWILGEHG 195
Query: 137 DSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYEVIKLKGYTSWAIGL 196
DSSV VWSG+NVAGVSL+ L+P++GTD D E WKEVHK VVESAYEVIKLKGYT+WAIGL
Sbjct: 196 DSSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAYEVIKLKGYTNWAIGL 255
Query: 197 SVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGISDLVKVTLTSEEEA 256
SVADL ES++KNL R+HPVSTM+KG+YGI+++VFLS+PCIL G++ ++ L +E A
Sbjct: 256 SVADLIESMLKNLSRIHPVSTMVKGMYGIENEVFLSLPCILNARGLTSVINQKLKDDEVA 315
Query: 257 RLKKSADTLWGIQKELQ 273
+LKKSADTLW IQK+L+
Sbjct: 316 QLKKSADTLWDIQKDLK 332
Score = 121 bits (304), Expect = 6e-28
Identities = 65/82 (79%), Positives = 72/82 (87%), Gaps = 1/82 (1%)
Query: 1 MATLKDQLIYNLLKEEQT-PQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLK 59
MATLK++LI + +EE T P NKITVVGVG VGMACAISIL K LADELALVDV+EDKLK
Sbjct: 1 MATLKEKLIAPVAEEEATVPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLK 60
Query: 60 GEMMDLQHGSLFLRTPKIVSGK 81
GEMMDLQHGSLFL+TPKIV+ K
Sbjct: 61 GEMMDLQHGSLFLQTPKIVADK 82
>gi|103472011 ubiquitin-conjugating enzyme E2-like isoform a [Homo
sapiens]
Length = 471
Score = 158 bits (400), Expect = 4e-39
Identities = 97/311 (31%), Positives = 150/311 (48%), Gaps = 71/311 (22%)
Query: 16 EQTPQNKITVVGVGAVGMACAISILMKDLAD----------------ELALVDVIEDKLK 59
E NKITVVG G +G+AC ++I K +AD +L + ++ ++
Sbjct: 178 ENKTVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEIS 237
Query: 60 GEMMDLQHGSLFLRTPK------------------------------------IVSGKVD 83
++ H + + T + S V+
Sbjct: 238 KDLSASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVE 297
Query: 84 ILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVW 143
I+TYV WK+S FP NRVIG GCNLDS R +Y++ L WV+GE G+ V W
Sbjct: 298 IMTYVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKAQTSGKEVWVIGEQGEDKVLTW 357
Query: 144 SGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYEVIKLKGYTSWAIGLSVADLAE 203
SG + Q+ A E++++KG SW++GLSVAD+ +
Sbjct: 358 SGQEEVVSHTSQV------------------QLSNRAMELLRVKGQRSWSVGLSVADMVD 399
Query: 204 SIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGISDLVKVTLTSEE-EARLKKSA 262
SI+ N ++VH VS + KG Y I +VFLS+PCILG NG+S+++K TL + +L+ SA
Sbjct: 400 SIVNNKKKVHSVSALAKGYYDINSEVFLSLPCILGTNGVSEVIKTTLKEDTVTEKLQSSA 459
Query: 263 DTLWGIQKELQ 273
++ +Q++L+
Sbjct: 460 SSIHSLQQQLK 470
>gi|103472015 ubiquitin-conjugating enzyme E2-like isoform b [Homo
sapiens]
Length = 379
Score = 80.9 bits (198), Expect = 1e-15
Identities = 53/182 (29%), Positives = 77/182 (42%), Gaps = 52/182 (28%)
Query: 16 EQTPQNKITVVGVGAVGMACAISILMKDLAD----------------ELALVDVIEDKLK 59
E NKITVVG G +G+AC ++I K +AD +L + ++ ++
Sbjct: 178 ENKTVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEIS 237
Query: 60 GEMMDLQHGSLFLRTPK------------------------------------IVSGKVD 83
++ H + + T + S V+
Sbjct: 238 KDLSASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVE 297
Query: 84 ILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVW 143
I+TYV WK+S FP NRVIG GCNLDS R +Y++ L WV+GE G+ V W
Sbjct: 298 IMTYVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKAQTSGKEVWVIGEQGEDKVLTW 357
Query: 144 SG 145
SG
Sbjct: 358 SG 359
>gi|9910280 UDP-glucose ceramide glucosyltransferase-like 1 [Homo
sapiens]
Length = 1555
Score = 31.6 bits (70), Expect = 0.78
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 13/70 (18%)
Query: 153 LKTLHPDLGTDKDKEQWKEVHKQVVESAYEVIKLKGY--------TSWAIGLSVADLAES 204
L+ LHPDL + Q KE+ K +VES E+ LK + T+ I S +LA
Sbjct: 290 LRDLHPDL-----EGQLKELRKHLVESTNEMAPLKVWQLQDLSFQTAARILASPVELALV 344
Query: 205 IMKNLRRVHP 214
+MK+L + P
Sbjct: 345 VMKDLSQNFP 354
>gi|24797065 zinc finger protein 212 [Homo sapiens]
Length = 495
Score = 30.0 bits (66), Expect = 2.3
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 16/108 (14%)
Query: 167 EQW-KEVHKQVVESAYEV---IKLKGYTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGL 222
E W KE+++ V+ES YE +K+ G T A+L ++ +L P G
Sbjct: 159 EDWQKELYRNVMESNYETLVSLKVLGQTE-----GEAELGTEMLGDLEEEGPGGAHPAGG 213
Query: 223 YGIKDDVFLSVPCILGQNGISDLV-KVTLTSEEEARLKKSADTLWGIQ 269
IK ++ + Q G +DL + + +EE+A L LWG Q
Sbjct: 214 VMIKQELQYT------QEGPADLPGEFSCIAEEQAFLSPEQTELWGGQ 255
>gi|133908616 glycerol-3-phosphate dehydrogenase 2, mitochondrial
[Homo sapiens]
Length = 727
Score = 29.6 bits (65), Expect = 3.0
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Query: 12 LLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLF 71
LL + T + I V+G GA G CA+ + + L L D L HG +
Sbjct: 61 LLTLQNTSEFDILVIGGGATGSGCALDAVTRGLKTALVERDDFSSGTSSRSTKLIHGGVR 120
Query: 72 LRTPKIVSGKVDILTY 87
I+ K+DI Y
Sbjct: 121 YLQKAIM--KLDIEQY 134
>gi|133908614 glycerol-3-phosphate dehydrogenase 2, mitochondrial
[Homo sapiens]
Length = 727
Score = 29.6 bits (65), Expect = 3.0
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Query: 12 LLKEEQTPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLF 71
LL + T + I V+G GA G CA+ + + L L D L HG +
Sbjct: 61 LLTLQNTSEFDILVIGGGATGSGCALDAVTRGLKTALVERDDFSSGTSSRSTKLIHGGVR 120
Query: 72 LRTPKIVSGKVDILTY 87
I+ K+DI Y
Sbjct: 121 YLQKAIM--KLDIEQY 134
>gi|194097398 protein tyrosine phosphatase, receptor type, G precursor
[Homo sapiens]
Length = 1445
Score = 29.3 bits (64), Expect = 3.9
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 9 IYNLLKEEQTPQNKITVV----GVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMD 64
+ N++KEE ++ T+V G + GM CA++ L + L +E A VDV + +M++
Sbjct: 1332 LINVIKEEALTRDGPTIVHDEYGAVSAGMLCALTTLSQQLENENA-VDVFQ---VAKMIN 1387
Query: 65 LQHGSLF 71
L +F
Sbjct: 1388 LMRPGVF 1394
>gi|73623028 carnitine palmitoyltransferase 1A liver isoform 2 [Homo
sapiens]
Length = 756
Score = 28.1 bits (61), Expect = 8.6
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Query: 125 LSCHGWVLGEHGDSS--VPVWSGM 146
LS HGW+ EHG S +W GM
Sbjct: 130 LSYHGWMFTEHGKMSRATKIWMGM 153
>gi|73623030 carnitine palmitoyltransferase 1A liver isoform 1 [Homo
sapiens]
Length = 773
Score = 28.1 bits (61), Expect = 8.6
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Query: 125 LSCHGWVLGEHGDSS--VPVWSGM 146
LS HGW+ EHG S +W GM
Sbjct: 130 LSYHGWMFTEHGKMSRATKIWMGM 153
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,796,996
Number of Sequences: 37866
Number of extensions: 404812
Number of successful extensions: 887
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 864
Number of HSP's gapped (non-prelim): 26
length of query: 274
length of database: 18,247,518
effective HSP length: 101
effective length of query: 173
effective length of database: 14,423,052
effective search space: 2495187996
effective search space used: 2495187996
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.