Guide to the Human Genome
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Name: FA2H Sequence: fasta or formatted (372aa) NCBI GI: 205360949
Description:

fatty acid 2-hydroxylase

Referenced in:

Sphingomyelin, Ceramides, and Glycolipids

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         23           2
 C cysteine            0.8          3           1
 D aspartate           4.0         15           1
 E glutamate           4.6         17           2
 F phenylalanine       5.6         21           1
 G glycine             7.3         27           2
 H histidine           6.2         23           2
 I isoleucine          3.0         11           2
 K lysine              4.3         16           1
 L leucine            11.3         42           2
 M methionine          2.7         10           1
 N asparagine          0.8          3           1
 P proline             7.5         28           3
 Q glutamine           3.8         14           2
 R arginine            5.4         20           2
 S serine              6.7         25           2
 T threonine           4.3         16           2
 V valine              7.3         27           2
 W tryptophan          3.0         11           1
 Y tyrosine            5.4         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fatty acid 2-hydroxylase 
CYB5B                 0.042   cytochrome b5 outer mitochondrial membrane precursor...
CYB5A                 0.039   cytochrome b-5 isoform 1 
CYB5A                 0.038   cytochrome b-5 isoform 2 
FADS1                 0.026   fatty acid desaturase 1 
SUOX                  0.025   sulfite oxidase 
SUOX                  0.025   sulfite oxidase 
SUOX                  0.025   sulfite oxidase 
FADS3                 0.022   fatty acid desaturase 3 
CYB5R4                0.020   cytochrome b5 reductase 4 
FADS2                 0.012   fatty acid desaturase 2 
XIRP1                 0.010   xin actin-binding repeat containing 1 
OR2AT4                0.009   olfactory receptor, family 2, subfamily AT, member 4...
GRIN3B                0.008   glutamate receptor, ionotropic, N-methyl-D-aspartate...
CYB5D1                0.008   cytochrome b5 domain containing 1 
DDX42                 0.007   DEAD box polypeptide 42 protein 
DDX42                 0.007   DEAD box polypeptide 42 protein 
C10orf81              0.007   hypothetical protein LOC79949 
LOC100290832          0.005   PREDICTED: hypothetical protein XP_002347902 
LOC100289128          0.005   PREDICTED: hypothetical protein XP_002343651 
NBAS                  0.005   neuroblastoma-amplified protein 
SC4MOL                0.005   sterol-C4-methyl oxidase-like isoform 2 
SC4MOL                0.005   sterol-C4-methyl oxidase-like isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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