Guide to the Human Genome
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Name: ST7L Sequence: fasta or formatted (575aa) NCBI GI: 20270257
Description:

suppression of tumorigenicity 7-like isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {558aa} suppression of tumorigenicity 7-like isoform 2
alt prot {544aa} suppression of tumorigenicity 7-like isoform 3
alt prot {555aa} suppression of tumorigenicity 7-like isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         55           3
 C cysteine            1.9         11           1
 D aspartate           3.0         17           2
 E glutamate           7.5         43           3
 F phenylalanine       4.5         26           2
 G glycine             5.6         32           2
 H histidine           3.0         17           2
 I isoleucine          4.7         27           1
 K lysine              4.3         25           2
 L leucine            12.0         69           2
 M methionine          2.1         12           1
 N asparagine          3.3         19           2
 P proline             5.7         33           2
 Q glutamine           3.8         22           2
 R arginine            6.1         35           2
 S serine              6.8         39           2
 T threonine           6.3         36           2
 V valine              4.5         26           1
 W tryptophan          1.9         11           2
 Y tyrosine            3.5         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   suppression of tumorigenicity 7-like isoform 1 [Homo... 
ST7L                  0.962   suppression of tumorigenicity 7-like isoform 2 [Homo...
ST7L                  0.942   suppression of tumorigenicity 7-like isoform 4 [Homo...
ST7L                  0.927   suppression of tumorigenicity 7-like isoform 3 [Homo...
ST7                   0.708   suppression of tumorigenicity 7 isoform a 
ST7                   0.704   suppression of tumorigenicity 7 isoform b 
KRT72                 0.007   keratin 72 isoform 2 
YTHDC2                0.006   YTH domain containing 2 
OSBP2                 0.005   oxysterol binding protein 2 isoform a 
CALML6                0.005   calmodulin-like 6 
PPFIA3                0.004   PTPRF interacting protein alpha 3 
CCDC13                0.004   coiled-coil domain containing 13 
TAF7L                 0.004   TATA box binding protein-associated factor, RNA poly...
ADAMTS4               0.004   ADAM metallopeptidase with thrombospondin type 1 mo...
PDE4DIP               0.004   phosphodiesterase 4D interacting protein isoform 2 [...
PDE4DIP               0.004   phosphodiesterase 4D interacting protein isoform 5 [...
PDE4DIP               0.004   phosphodiesterase 4D interacting protein isoform 1 ...
PIGZ                  0.004   phosphatidylinositol glycan anchor biosynthesis, cla...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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