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Name: LGALS12 Sequence: fasta or formatted (336aa) NCBI GI: 20127659
Description:

lectin, galactoside-binding, soluble, 12 isoform 2

Referenced in:

Lectin Families

Other entries for this name:
alt prot [337aa] lectin, galactoside-binding, soluble, 12 isoform 1
alt prot [327aa] lectin, galactoside-binding, soluble, 12 isoform 3
alt prot [275aa] lectin, galactoside-binding, soluble, 12 isoform 4
alt prot [266aa] lectin, galactoside-binding, soluble, 12 isoform 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         19           2
 C cysteine            2.1          7           1
 D aspartate           2.7          9           1
 E glutamate           3.9         13           2
 F phenylalanine       7.1         24           2
 G glycine             8.6         29           2
 H histidine           4.8         16           1
 I isoleucine          4.5         15           2
 K lysine              2.4          8           2
 L leucine            12.2         41           3
 M methionine          1.8          6           1
 N asparagine          2.4          8           1
 P proline             8.3         28           2
 Q glutamine           5.7         19           2
 R arginine            6.5         22           2
 S serine              6.8         23           2
 T threonine           3.6         12           2
 V valine              7.7         26           2
 W tryptophan          1.5          5           1
 Y tyrosine            1.8          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lectin, galactoside-binding, soluble, 12 isoform 2 [... 
LGALS12               0.994   lectin, galactoside-binding, soluble, 12 isoform 1 ...
LGALS12               0.963   lectin, galactoside-binding, soluble, 12 isoform 3 ...
LGALS12               0.808   lectin, galactoside-binding, soluble, 12 isoform 4 ...
LGALS12               0.769   lectin, galactoside-binding, soluble, 12 isoform 5 ...
LGALS8                0.186   galectin-8 isoform b 
LGALS8                0.186   galectin-8 isoform b 
LGALS8                0.164   galectin-8 isoform a 
LGALS8                0.164   galectin-8 isoform a 
LGALS4                0.149   galectin-4 
LGALS9B               0.140   galectin-9 like 
LGALS9                0.140   galectin-9 isoform short 
LGALS9C               0.137   galectin 9 like 
LGALS9                0.131   galectin-9 isoform long 
LGALS7                0.092   galectin-7 
LGALS7B               0.092   galectin-7B 
LGALS3                0.082   galectin 3 
HSPC159               0.057   hypothetical protein LOC29094 
LGALS2                0.043   lectin, galactoside-binding, soluble, 2 
LGALS14               0.040   lectin, galactoside-binding, soluble, 14 isoform 2 [...
LGALS14               0.037   lectin, galactoside-binding, soluble, 14 isoform 1 [H...
LOC148003             0.036   PREDICTED: similar to lectin, galactoside-binding, ...
LOC148003             0.036   PREDICTED: similar to lectin, galactoside-binding, ...
LOC148003             0.036   PREDICTED: similar to lectin, galactoside-binding, s...
LOC148003             0.036   PREDICTED: similar to lectin, galactoside-binding, ...
LGALS1                0.034   galectin-1 
LOC148003             0.033   PREDICTED: similar to lectin, galactoside-binding, s...
LOC148003             0.033   PREDICTED: similar to lectin, galactoside-binding, ...
LGALS13               0.030   galectin-13 
CLC                   0.021   Charcot-Leyden crystal protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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