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Search of human proteins with 20127609
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|20127609 carbohydrate (N-acetylgalactosamine 4-0)
sulfotransferase 8 [Homo sapiens]
(424 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|189217888 carbohydrate (N-acetylgalactosamine 4-0) sulfotrans... 866 0.0
gi|189217886 carbohydrate (N-acetylgalactosamine 4-0) sulfotrans... 866 0.0
gi|20127609 carbohydrate (N-acetylgalactosamine 4-0) sulfotransf... 866 0.0
gi|116235458 GalNAc-4-sulfotransferase 2 [Homo sapiens] 390 e-109
gi|8923758 carbohydrate sulfotransferase 11 [Homo sapiens] 216 4e-56
gi|8922112 carbohydrate sulfotransferase 12 [Homo sapiens] 181 9e-46
gi|23097238 carbohydrate sulfotransferase 13 [Homo sapiens] 178 7e-45
gi|18497304 dermatan 4 sulfotransferase 1 [Homo sapiens] 161 9e-40
gi|4758540 HNK-1 sulfotransferase [Homo sapiens] 152 4e-37
gi|156416026 zinc finger protein 219 [Homo sapiens] 35 0.17
gi|156415998 zinc finger protein 219 [Homo sapiens] 35 0.17
gi|156415996 zinc finger protein 219 [Homo sapiens] 35 0.17
gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-ch... 34 0.29
gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens] 32 0.84
gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens] 32 0.84
gi|116256464 hypothetical protein LOC343990 [Homo sapiens] 32 0.84
gi|239741753 PREDICTED: hypothetical protein [Homo sapiens] 32 1.1
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 31 1.9
gi|169160905 PREDICTED: similar to nuclear transport factor 2 [H... 31 1.9
gi|4502523 calcium channel, voltage-dependent, N type, alpha 1B ... 31 1.9
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 31 1.9
gi|238859651 pleckstrin homology domain containing family A memb... 31 2.4
gi|169163761 PREDICTED: hypothetical protein isoform 1 [Homo sap... 31 2.4
gi|239749957 PREDICTED: hypothetical protein [Homo sapiens] 31 2.4
gi|156766068 CDC42 binding protein kinase gamma (DMPK-like) [Hom... 31 2.4
gi|169214061 PREDICTED: hypothetical protein [Homo sapiens] 30 3.2
gi|169214437 PREDICTED: hypothetical protein [Homo sapiens] 30 3.2
gi|169213353 PREDICTED: hypothetical protein [Homo sapiens] 30 3.2
gi|105990541 ATP-binding cassette, sub-family A member 4 [Homo s... 30 3.2
gi|41406050 docking protein 2 [Homo sapiens] 30 3.2
>gi|189217888 carbohydrate (N-acetylgalactosamine 4-0)
sulfotransferase 8 [Homo sapiens]
Length = 424
Score = 866 bits (2238), Expect = 0.0
Identities = 424/424 (100%), Positives = 424/424 (100%)
Query: 1 MTLRPGTMRLACMFSSILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPP 60
MTLRPGTMRLACMFSSILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPP
Sbjct: 1 MTLRPGTMRLACMFSSILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPP 60
Query: 61 GGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMP 120
GGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMP
Sbjct: 61 GGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMP 120
Query: 121 AAATIPANSSDAPFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYRASSSRRAVTPRH 180
AAATIPANSSDAPFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYRASSSRRAVTPRH
Sbjct: 121 AAATIPANSSDAPFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYRASSSRRAVTPRH 180
Query: 181 VSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQHNTVHYGSALKRLDTFD 240
VSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQHNTVHYGSALKRLDTFD
Sbjct: 181 VSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQHNTVHYGSALKRLDTFD 240
Query: 241 RQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFGKAILARYRANASREAL 300
RQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFGKAILARYRANASREAL
Sbjct: 241 RQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFGKAILARYRANASREAL 300
Query: 301 RTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLS 360
RTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLS
Sbjct: 301 RTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLS 360
Query: 361 LIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKPF 420
LIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKPF
Sbjct: 361 LIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKPF 420
Query: 421 ADLY 424
ADLY
Sbjct: 421 ADLY 424
>gi|189217886 carbohydrate (N-acetylgalactosamine 4-0)
sulfotransferase 8 [Homo sapiens]
Length = 424
Score = 866 bits (2238), Expect = 0.0
Identities = 424/424 (100%), Positives = 424/424 (100%)
Query: 1 MTLRPGTMRLACMFSSILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPP 60
MTLRPGTMRLACMFSSILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPP
Sbjct: 1 MTLRPGTMRLACMFSSILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPP 60
Query: 61 GGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMP 120
GGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMP
Sbjct: 61 GGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMP 120
Query: 121 AAATIPANSSDAPFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYRASSSRRAVTPRH 180
AAATIPANSSDAPFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYRASSSRRAVTPRH
Sbjct: 121 AAATIPANSSDAPFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYRASSSRRAVTPRH 180
Query: 181 VSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQHNTVHYGSALKRLDTFD 240
VSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQHNTVHYGSALKRLDTFD
Sbjct: 181 VSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQHNTVHYGSALKRLDTFD 240
Query: 241 RQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFGKAILARYRANASREAL 300
RQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFGKAILARYRANASREAL
Sbjct: 241 RQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFGKAILARYRANASREAL 300
Query: 301 RTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLS 360
RTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLS
Sbjct: 301 RTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLS 360
Query: 361 LIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKPF 420
LIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKPF
Sbjct: 361 LIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKPF 420
Query: 421 ADLY 424
ADLY
Sbjct: 421 ADLY 424
>gi|20127609 carbohydrate (N-acetylgalactosamine 4-0)
sulfotransferase 8 [Homo sapiens]
Length = 424
Score = 866 bits (2238), Expect = 0.0
Identities = 424/424 (100%), Positives = 424/424 (100%)
Query: 1 MTLRPGTMRLACMFSSILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPP 60
MTLRPGTMRLACMFSSILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPP
Sbjct: 1 MTLRPGTMRLACMFSSILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPP 60
Query: 61 GGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMP 120
GGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMP
Sbjct: 61 GGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMP 120
Query: 121 AAATIPANSSDAPFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYRASSSRRAVTPRH 180
AAATIPANSSDAPFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYRASSSRRAVTPRH
Sbjct: 121 AAATIPANSSDAPFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYRASSSRRAVTPRH 180
Query: 181 VSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQHNTVHYGSALKRLDTFD 240
VSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQHNTVHYGSALKRLDTFD
Sbjct: 181 VSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQHNTVHYGSALKRLDTFD 240
Query: 241 RQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFGKAILARYRANASREAL 300
RQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFGKAILARYRANASREAL
Sbjct: 241 RQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFGKAILARYRANASREAL 300
Query: 301 RTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLS 360
RTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLS
Sbjct: 301 RTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLS 360
Query: 361 LIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKPF 420
LIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKPF
Sbjct: 361 LIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKPF 420
Query: 421 ADLY 424
ADLY
Sbjct: 421 ADLY 424
>gi|116235458 GalNAc-4-sulfotransferase 2 [Homo sapiens]
Length = 443
Score = 390 bits (1003), Expect = e-109
Identities = 213/436 (48%), Positives = 276/436 (63%), Gaps = 34/436 (7%)
Query: 13 MFSSILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPPGGSQDGDLKEP- 71
+F S+L+FG AGLLLF+ LQ E +Q G + R+ G P
Sbjct: 13 VFLSVLIFGVAGLLLFMYLQVWIE---EQHTG---RVEKRREQKVTSGWGPVKYLRPVPR 66
Query: 72 ---TERVTRDLSSGAPRGRNLPAPDQPQPPL----QRGTRLRLRQRRRR----------- 113
TE++ +++ P+ + + L +R TRL + +
Sbjct: 67 IMSTEKIQEHITNQNPKFHMPEDVREKKENLLLNSERSTRLLTKTSHSQGGDQALSKSTG 126
Query: 114 ----LLIKKMPAAATIPANSSDAPF---IRPGPGTL--DGRWVSLHRSQQERKRVMQEAC 164
LI+K A T+ S+ + I P +L D +W +Q++R+ +QE C
Sbjct: 127 SPTEKLIEKRQGAKTVFNKFSNMNWPVDIHPLNKSLVKDNKWKKTEETQEKRRSFLQEFC 186
Query: 165 AKYRASSSRRAVTPRHVSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQH 224
KY S ++ VSRI+VED+H++LYCEVPKAGCSNWKR+LMVL GLASS +I H
Sbjct: 187 KKYGGVSHHQSHLFHTVSRIYVEDKHKILYCEVPKAGCSNWKRILMVLNGLASSAYNISH 246
Query: 225 NTVHYGSALKRLDTFDRQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFG 284
N VHYG LK+LD+FD +GI RL+TYTK +FVR+P ERLVSAFRDKFEHPNSYYHPVFG
Sbjct: 247 NAVHYGKHLKKLDSFDLKGIYTRLNTYTKAVFVRDPMERLVSAFRDKFEHPNSYYHPVFG 306
Query: 285 KAILARYRANASREALRTGSGVRFPEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDF 344
KAI+ +YR NA EAL GSGV+F EF+ YLLD HRPVGMDIHW+ VS+LC PCLI+YDF
Sbjct: 307 KAIIKKYRPNACEEALINGSGVKFKEFIHYLLDSHRPVGMDIHWEKVSKLCYPCLINYDF 366
Query: 345 VGKFESMEDDANFFLSLIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTY 404
VGKFE++E+DAN+FL +I AP+ L FP FKDRHS + RT A++ QY L+ +RQ Y
Sbjct: 367 VGKFETLEEDANYFLQMIGAPKELKFPNFKDRHSSDERTNAQVVRQYLKDLTRTERQLIY 426
Query: 405 DFYYMDYLMFNYSKPF 420
DFYY+DYLMFNY+ PF
Sbjct: 427 DFYYLDYLMFNYTTPF 442
>gi|8923758 carbohydrate sulfotransferase 11 [Homo sapiens]
Length = 352
Score = 216 bits (549), Expect = 4e-56
Identities = 114/272 (41%), Positives = 160/272 (58%), Gaps = 9/272 (3%)
Query: 153 QQERKRVMQEACAKYRASSSRRAVTPRHVSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVL 212
Q R +V A S RR +TP + + V++ H ++YC VPK C+NWKR++MVL
Sbjct: 79 QMRRDQVTDTCRANSATSRKRRVLTPNDLKHLVVDEDHELIYCYVPKVACTNWKRLMMVL 138
Query: 213 AGLA--SSTADIQHNTVHYGSALKRLDTFDRQGILHRLSTYTKMLFVREPFERLVSAFRD 270
G S +I N H + LK L+ + I HRL +Y K LFVREPFERLVSA+R+
Sbjct: 139 TGRGKYSDPMEIPANEAHVSANLKTLNQYSIPEINHRLKSYMKFLFVREPFERLVSAYRN 198
Query: 271 KF-EHPNSYYHPVFGKAILARYRANASREALRTGSGVRFPEFVQYLLDVH--RPVGMDIH 327
KF + N +H +G I+ R R NA++EALR G V+F EFV YL+D H R + H
Sbjct: 199 KFTQKYNISFHKRYGTKIIKRQRKNATQEALRKGDDVKFEEFVAYLIDPHTQREEPFNEH 258
Query: 328 WDHVSRLCSPCLIDYDFVGKFESMEDDANFFLSLIRAPRNLTFPRFKDRHSQEARTTARI 387
W V LC PC I YD VGK+E++E+D+N+ L L L FP + ++ RTT +
Sbjct: 259 WQTVYSLCHPCHIHYDLVGKYETLEEDSNYVLQLAGVGSYLKFPTY----AKSTRTTDEM 314
Query: 388 AHQYFAQLSALQRQRTYDFYYMDYLMFNYSKP 419
++F +S+ + + Y+ Y +D+LMFNYS P
Sbjct: 315 TTEFFQNISSEHQTQLYEVYKLDFLMFNYSVP 346
>gi|8922112 carbohydrate sulfotransferase 12 [Homo sapiens]
Length = 414
Score = 181 bits (460), Expect = 9e-46
Identities = 115/295 (38%), Positives = 154/295 (52%), Gaps = 31/295 (10%)
Query: 151 RSQQERKRVMQEACAKYRAS--SSRRA---VTPRHVSRIFVEDRHRVLYCEVPKAGCSNW 205
R Q ER+ V++ CA + + RA + +S + V+DRH +YC VPK C+NW
Sbjct: 119 RQQAERRSVLRGFCANSSLAFPTKERAFDDIPNSELSHLIVDDRHGAIYCYVPKVACTNW 178
Query: 206 KRVLMVLAGLA-------SSTADIQHNTVHYGSALKRLDTFDRQ-GILHR------LSTY 251
KRV++VL+G I VH SA + F R+ G L R L Y
Sbjct: 179 KRVMIVLSGSLLHRGAPYRDPLRIPREHVHNASAHLTFNKFWRRYGKLSRHLMKVKLKKY 238
Query: 252 TKMLFVREPFERLVSAFRDKFEHPNSYYHPVFGKAILARYRANAS-----REALRTGSGV 306
TK LFVR+PF RL+SAFR KFE N ++ F +L Y + S REA R G V
Sbjct: 239 TKFLFVRDPFVRLISAFRSKFELENEEFYRKFAVPMLRLYANHTSLPASAREAFRAGLKV 298
Query: 307 RFPEFVQYLLDVH--RPVGMDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLSLIRA 364
F F+QYLLD H + + HW V RLC PC IDYDFVGK E++++DA L L++
Sbjct: 299 SFANFIQYLLDPHTEKLAPFNEHWRQVYRLCHPCQIDYDFVGKLETLDEDAAQLLQLLQV 358
Query: 365 PRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKP 419
R L FP S RT + +FA++ RQ+ Y Y D+++F Y KP
Sbjct: 359 DRQLRFP-----PSYRNRTASSWEEDWFAKIPLAWRQQLYKLYEADFVLFGYPKP 408
>gi|23097238 carbohydrate sulfotransferase 13 [Homo sapiens]
Length = 341
Score = 178 bits (452), Expect = 7e-45
Identities = 104/276 (37%), Positives = 150/276 (54%), Gaps = 9/276 (3%)
Query: 148 SLHRSQQERKRVMQEACAKYRASSSRRAVTPRHVSRIFVEDRHRVLYCEVPKAGCSNWKR 207
+L + ++R+ ++ AC+++ S +R + P + + V+D H +LYC VPK C+NWKR
Sbjct: 65 TLAKVHRQRRDLLNSACSRH--SRRQRLLQPEDLRHVLVDDAHGLLYCYVPKVACTNWKR 122
Query: 208 VLMVLAGLA-SSTADIQHNTVHYGSALKRLDTFDRQGILHRLSTYTKMLFVREPFERLVS 266
VL+ L+G A I H L L F I RL Y LFVREPFERL S
Sbjct: 123 VLLALSGQARGDPRAISAQEAHAPGRLPSLADFSPAEINRRLRAYLAFLFVREPFERLAS 182
Query: 267 AFRDKFEHP-NSYYHPVFGKAILARYRANASREALRTGSGVRFPEFVQYLLD--VHRPVG 323
A+R+K P ++ + +G I+ R R A +A G VRF EF+ YLLD R
Sbjct: 183 AYRNKLARPYSAAFQRRYGARIVQRLRPRALPDARARGHDVRFAEFLAYLLDPRTRREEP 242
Query: 324 MDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLSLIRAPRNLTFPRFKDRHSQEART 383
+ HW+ LC PC + YD VGKFE++ +DA F L L A +L+FP + A
Sbjct: 243 FNEHWERAHALCHPCRLRYDVVGKFETLAEDAAFVLGLAGA-SDLSFP--GPPRPRGAAA 299
Query: 384 TARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKP 419
+ +A + F +S ++R +D Y MD+L+FNYS P
Sbjct: 300 SRDLAARLFRDISPFYQRRLFDLYKMDFLLFNYSAP 335
>gi|18497304 dermatan 4 sulfotransferase 1 [Homo sapiens]
Length = 376
Score = 161 bits (408), Expect = 9e-40
Identities = 108/291 (37%), Positives = 143/291 (49%), Gaps = 19/291 (6%)
Query: 136 RPGPGTLDGRWVSLHRSQQERKRVMQEACAK-------YRASSSRRAVTPRHVSRIFVED 188
+PG +L L Q R R ++ C + + +R RH I V D
Sbjct: 89 KPGGLSLRAGDADLQVRQDVRNRTLRAVCGQPGMPRDPWDLPVGQRRTLLRH---ILVSD 145
Query: 189 RHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQHNTVHYGSALKRLDTFDRQGILHRL 248
R+R LYC VPK CSNWKRV+ VLAG+ S D++ H S L L + I +RL
Sbjct: 146 RYRFLYCYVPKVACSNWKRVMKVLAGVLDSV-DVRLKMDHR-SDLVFLADLRPEEIRYRL 203
Query: 249 STYTKMLFVREPFERLVSAFRDKFEHPNSYYHPVFGKAILARYRANASREALRTGSGVRF 308
Y K LFVREP ERL+SA+R+KF Y +G I+ RYRA A G V F
Sbjct: 204 QHYFKFLFVREPLERLLSAYRNKFGEIREYQQR-YGAEIVRRYRAGAGPSP--AGDDVTF 260
Query: 309 PEFVQYLLDVHRPVGMDIHWDHVSRLCSPCLIDYDFVGKFESMEDDANFFLSLIRAPRNL 368
PEF++YL+D P M+ HW V LC PC + YDFVG +E +E DAN L +RAP ++
Sbjct: 261 PEFLRYLVD-EDPERMNEHWMPVYHLCQPCAVHYDFVGSYERLEADANQVLEWVRAPPHV 319
Query: 369 TFPRFKDRHSQEARTTARIAHQYFAQLSALQRQRTYDFYYMDYLMFNYSKP 419
FP R + + H + Q Y +D+ +F Y P
Sbjct: 320 RFPA---RQAWYRPASPESLHYHLCSAPRALLQDVLPKYILDFSLFAYPLP 367
>gi|4758540 HNK-1 sulfotransferase [Homo sapiens]
Length = 356
Score = 152 bits (385), Expect = 4e-37
Identities = 103/318 (32%), Positives = 154/318 (48%), Gaps = 20/318 (6%)
Query: 114 LLIKKMPAAATIPANSSDAPFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYRASS-S 172
L + MP +P ++P L + ER +++ C + S
Sbjct: 42 LFLTTMPEVRKLPEEKHIPEELKPTGKELPDSQLVQPLVYMERLELIRNVCRDDALKNLS 101
Query: 173 RRAVTPRHVSRIFVEDRHRVLYCEVPKAGCSNWKRVLMVLAGLASSTADIQHNTV--HYG 230
V+ + RIFV D+H++L+C+ PK G + WK+VL+VL G SS +I N V H
Sbjct: 102 HTPVSKFVLDRIFVCDKHKILFCQTPKVGNTQWKKVLIVLNGAFSSIEEIPENVVHDHEK 161
Query: 231 SALKRLDTFDRQGILHRLSTYTKMLFVREPFERLVSAFRDKFEHP---NSYYHPVFGKAI 287
+ L RL +F I RL TY K VR+PFERL+SAF+DKF H +Y I
Sbjct: 162 NGLPRLSSFSDAEIQKRLKTYFKFFIVRDPFERLISAFKDKFVHNPRFEPWYRHEIAPGI 221
Query: 288 LARYRANASREALRTGSGVRFPEFVQYLLDV-HRPVGMD-----IHWDHVSRLCSPCLID 341
+ +YR N + G++F +FV+YL D HR + + IHW LC+PC I
Sbjct: 222 IRKYRRNRTET-----RGIQFEDFVRYLGDPNHRWLDLQFGDHIIHWVTYVELCAPCEIM 276
Query: 342 YDFVGKFESMEDDANFFLSLIRAPRNLTFPRFKDRHSQEARTTARIAHQYFAQLSALQRQ 401
Y +G E++EDDA + L +++P + RT ++ H YF +S +
Sbjct: 277 YSVIGHHETLEDDAPYILKEAGIDHLVSYPTIPPGITVYNRT--KVEH-YFLGISKRDIR 333
Query: 402 RTYDFYYMDYLMFNYSKP 419
R Y + D+ +F Y KP
Sbjct: 334 RLYARFEGDFKLFGYQKP 351
>gi|156416026 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 34.7 bits (78), Expect = 0.17
Identities = 29/88 (32%), Positives = 38/88 (43%), Gaps = 11/88 (12%)
Query: 54 PHHDLPPGGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRR 113
PH D G+Q G LK +R R+ SGA G P +P PP QRG+ + +
Sbjct: 529 PHCDY--AGTQSGSLKYHLQRHHREQRSGAGPG----PPPEPPPPSQRGSAPQSGAKP-- 580
Query: 114 LLIKKMPAAATIPANSSDAPFIRPGPGT 141
PA A+S P GPG+
Sbjct: 581 ---SPQPATWVEGASSPRPPSSGAGPGS 605
>gi|156415998 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 34.7 bits (78), Expect = 0.17
Identities = 29/88 (32%), Positives = 38/88 (43%), Gaps = 11/88 (12%)
Query: 54 PHHDLPPGGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRR 113
PH D G+Q G LK +R R+ SGA G P +P PP QRG+ + +
Sbjct: 529 PHCDY--AGTQSGSLKYHLQRHHREQRSGAGPG----PPPEPPPPSQRGSAPQSGAKP-- 580
Query: 114 LLIKKMPAAATIPANSSDAPFIRPGPGT 141
PA A+S P GPG+
Sbjct: 581 ---SPQPATWVEGASSPRPPSSGAGPGS 605
>gi|156415996 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 34.7 bits (78), Expect = 0.17
Identities = 29/88 (32%), Positives = 38/88 (43%), Gaps = 11/88 (12%)
Query: 54 PHHDLPPGGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRR 113
PH D G+Q G LK +R R+ SGA G P +P PP QRG+ + +
Sbjct: 529 PHCDY--AGTQSGSLKYHLQRHHREQRSGAGPG----PPPEPPPPSQRGSAPQSGAKP-- 580
Query: 114 LLIKKMPAAATIPANSSDAPFIRPGPGT 141
PA A+S P GPG+
Sbjct: 581 ---SPQPATWVEGASSPRPPSSGAGPGS 605
>gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-chain
family member 2 [Homo sapiens]
Length = 1122
Score = 33.9 bits (76), Expect = 0.29
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 35 TELAPQQVPGIKFNIRPRQPHHDLPPGGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQ 94
T L P P NI+ H P S D +LK P+ER L AP A D
Sbjct: 524 TPLPPSAPPSADDNIKTTAEHLRGPLPPSADDNLKTPSERQLTPLPPSAPPS----ADDN 579
Query: 95 PQPPLQRGTRLRLRQRRRRLLIKK-MPAAATIP 126
+ P + L+ R +R++I + +P+ +++P
Sbjct: 580 IKTPAE---HLQFRFHPQRMIISRDLPSVSSLP 609
Score = 29.3 bits (64), Expect = 7.1
Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 6/70 (8%)
Query: 35 TELAPQQVPGIKFNIRPRQPHHDLPPGGSQDGDLKEPTERVTRDLSSGAPRGR--NLPAP 92
T L P P NI+ H P S D +LK P+ER L AP N+ P
Sbjct: 398 TPLPPSAPPSADDNIKTPAEHLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTP 457
Query: 93 DQ----PQPP 98
+ P PP
Sbjct: 458 AERLRGPLPP 467
Score = 28.9 bits (63), Expect = 9.2
Identities = 37/151 (24%), Positives = 55/151 (36%), Gaps = 6/151 (3%)
Query: 35 TELAPQQVPGIKFNIRPRQPHHDLPPGGSQDGDLKEPTERVTRDLSSGAPRGR--NLPAP 92
T L P P NI+ P S D +LK P+ER L AP N+ P
Sbjct: 909 TPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTP 968
Query: 93 -DQPQPPLQRGTRLRLRQRRRRLLIKKMPAAATIPANSSDAPFIR---PGPGTLDGRWVS 148
++ + PL L+ R L P+A T ++ P R P P + D +
Sbjct: 969 AERLRGPLPPSADDNLKTPSERQLTPLPPSAPTSADDNIKTPAERLRGPLPPSADDNLKT 1028
Query: 149 LHRSQQERKRVMQEACAKYRASSSRRAVTPR 179
+ QE + + RA+ P+
Sbjct: 1029 PPLATQEAEAEKPRKPKRQRAAEMEPPPEPK 1059
>gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens]
Length = 1337
Score = 32.3 bits (72), Expect = 0.84
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 34 PTELAPQQVPGIKFNIRPRQPHHDLPPGGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPD 93
P + PQQV + P HH+ PP S + P+ + +S +P R+LP
Sbjct: 156 PPPVMPQQV---NYQYPPGYSHHNFPPP-SFNSFQNNPSSFLPSANNSSSPHFRHLPPYP 211
Query: 94 QPQPPLQRGTRLRLR 108
P+ P +R + RL+
Sbjct: 212 LPKAPSERRSPERLK 226
>gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens]
Length = 1374
Score = 32.3 bits (72), Expect = 0.84
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 34 PTELAPQQVPGIKFNIRPRQPHHDLPPGGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPD 93
P + PQQV + P HH+ PP S + P+ + +S +P R+LP
Sbjct: 156 PPPVMPQQV---NYQYPPGYSHHNFPPP-SFNSFQNNPSSFLPSANNSSSPHFRHLPPYP 211
Query: 94 QPQPPLQRGTRLRLR 108
P+ P +R + RL+
Sbjct: 212 LPKAPSERRSPERLK 226
>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
Length = 962
Score = 32.3 bits (72), Expect = 0.84
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 8/117 (6%)
Query: 59 PPGGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKK 118
PPG + + + + TE + G P PP + + R +
Sbjct: 453 PPGPAPEPEREAETEPERGAGTEPERIGTEPSTAPAPSPPAPKSCL-----KHRPAAASE 507
Query: 119 MPAAATIPANSSDAPFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYRASSSRRA 175
PAA+ P ++++P + PGPG+LD + R + ER RA+ R+A
Sbjct: 508 GPAASP-PLAAAESPPVEPGPGSLDAEAAAPERPKAERAEA--PPAGAERAAPERKA 561
>gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 32.0 bits (71), Expect = 1.1
Identities = 33/96 (34%), Positives = 37/96 (38%), Gaps = 17/96 (17%)
Query: 58 LPPGGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLR----------- 106
L PGGS D D + R + AP + LP P PPL G R R
Sbjct: 69 LLPGGSADKDQEREPSLAARGTAPPAPPRQCLPT---PCPPLGHGLRPRPPPGTPPPRCP 125
Query: 107 --LRQRRRRLLIKKMPA-AATIPANSSDAPFIRPGP 139
L R L PA A T PA + A RPGP
Sbjct: 126 RTLAPGPRGLFPAPPPAPARTGPAGKAAADRGRPGP 161
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 31.2 bits (69), Expect = 1.9
Identities = 33/156 (21%), Positives = 62/156 (39%), Gaps = 3/156 (1%)
Query: 30 SLQDPTELAPQQVPGIKFNIRPRQPHHDLPPGGSQDGDLKEPTERVTRDLSSGAPRGRNL 89
S++ P + P P ++ + QP P + G + + + AP +
Sbjct: 1482 SVKTPETVVPT-APELQASASTDQPVTSEPTSRTTRGRKNRSSVKTPETVVPAAPELQPS 1540
Query: 90 PAPDQP--QPPLQRGTRLRLRQRRRRLLIKKMPAAATIPANSSDAPFIRPGPGTLDGRWV 147
+ DQP P R TR R + + +P A + ++S + P P + R
Sbjct: 1541 TSTDQPVTPEPTSRATRGRTNRSSVKTPESIVPIAPELQPSTSRNQLVTPEPTSRATRCR 1600
Query: 148 SLHRSQQERKRVMQEACAKYRASSSRRAVTPRHVSR 183
+ S + + V+ A + +S+ + VTP+ SR
Sbjct: 1601 TNRSSVKTPEPVVPTAPEPHPTTSTDQPVTPKLTSR 1636
>gi|169160905 PREDICTED: similar to nuclear transport factor 2 [Homo
sapiens]
Length = 340
Score = 31.2 bits (69), Expect = 1.9
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 109 QRRRRLLIKKMPAAATIPANSSDAPFIRPGPGTLDGR-WVSLHRSQQERKRVMQEACAKY 167
Q +R L +P + I S GPG GR W S RS + R+R C
Sbjct: 44 QEQRERLPSSIPLLSCIDQGPS-------GPGGGIGRAWASPSRSLRVRRRFAGAGCVSK 96
Query: 168 RASSSRRA 175
RAS S+RA
Sbjct: 97 RASVSKRA 104
>gi|4502523 calcium channel, voltage-dependent, N type, alpha 1B
subunit [Homo sapiens]
Length = 2339
Score = 31.2 bits (69), Expect = 1.9
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 11/96 (11%)
Query: 84 PRGRNL--PAPDQPQPPLQRGT-----RLRLRQRRRRLLIKKMPAAATIPANSSDAPFIR 136
PRG +L PD+P PP Q + R R+ R++ ++K P+ + A+ AP
Sbjct: 2029 PRGTHLCSTTPDRP-PPSQASSHHHHHRCHRRRDRKQRSLEKGPS---LSADMDGAPSSA 2084
Query: 137 PGPGTLDGRWVSLHRSQQERKRVMQEACAKYRASSS 172
GPG G + R ++ER++ + + + SSS
Sbjct: 2085 VGPGLPPGEGPTGCRRERERRQERGRSQERRQPSSS 2120
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 31.2 bits (69), Expect = 1.9
Identities = 31/138 (22%), Positives = 49/138 (35%), Gaps = 7/138 (5%)
Query: 16 SILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPPGGSQDGDLKEPTERV 75
++L G ++ + P AP+ P + + P + D P Q ++P+
Sbjct: 1304 NVLHTGKRWFIICPVAEHPAPEAPESSPPLPLSSLPPEASQDSAPYKDQLSSKEQPSFLA 1363
Query: 76 TRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMPAAATIPANSSDAPFI 135
++ L S A AP P P + PA +T+P +S
Sbjct: 1364 SQQLLSQAGPSNPPGAPPAPLAPSSPPVTALPQDGAA-------PATSTMPEPASGTASQ 1416
Query: 136 RPGPGTLDGRWVSLHRSQ 153
GPGT G L SQ
Sbjct: 1417 AGGPGTPQGLTSELETSQ 1434
>gi|238859651 pleckstrin homology domain containing family A member
4 isoform 1 [Homo sapiens]
Length = 779
Score = 30.8 bits (68), Expect = 2.4
Identities = 47/174 (27%), Positives = 73/174 (41%), Gaps = 30/174 (17%)
Query: 51 PRQPHHDL--PPGGSQDGDLKEP-----TERVTRDLSSGAPRGRNLPAPDQPQPPLQRGT 103
PR P D PPGG D DL P + RV+R + +P GR+LP+P
Sbjct: 533 PRSPETDWGRPPGG--DKDLASPHLGLGSPRVSR---ASSPEGRHLPSPQLGTKAPVARP 587
Query: 104 RLRLRQRRRRLLIKKMPAAATIPANSSDAPFIRP-GPGTLD-GRWVSLHRSQQ--ERKRV 159
R+ +++ R+ + PF RP P L GR +S R Q E++ V
Sbjct: 588 RMSAQEQLERMRRNQ----------ECGRPFPRPTSPRLLTLGRTLSPARRQPDVEQRPV 637
Query: 160 MQEACAKYRASSSRRAVTPRHVSRIF-VEDRHRVLYCEVPKA---GCSNWKRVL 209
+ + A+ SS +PR+ + + HR + +A S W R++
Sbjct: 638 VGHSGAQKWLRSSGSWSSPRNTTPYLPTSEGHRERVLSLSQALATEASQWHRMM 691
>gi|169163761 PREDICTED: hypothetical protein isoform 1 [Homo
sapiens]
Length = 166
Score = 30.8 bits (68), Expect = 2.4
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 64 QDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPL 99
+DG + P R RDLS A R LP P PQP L
Sbjct: 99 RDGGWRSPNRRCIRDLSRAALR---LPQPPPPQPNL 131
>gi|239749957 PREDICTED: hypothetical protein [Homo sapiens]
Length = 707
Score = 30.8 bits (68), Expect = 2.4
Identities = 42/147 (28%), Positives = 54/147 (36%), Gaps = 26/147 (17%)
Query: 3 LRPGTMRLACM-FSSILLFGAAGLLLFISLQDPTELAPQQVPGIKFNIRPRQP------H 55
+RP + C +L+ GA LL++ L D E+ P PR P
Sbjct: 13 VRPPGLAACCRPVQEVLVGGAVAGLLYLGLGDALEMPLSFSPEAIAPPAPRPPPCRGPLD 72
Query: 56 HDLPPGGSQDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRLL 115
DL P S G +P L S A R + AP PPL G + QR + L
Sbjct: 73 RDLAPSRS-GGSWPQPCR-----LRSPAARRGEICAPRGGSPPLPEG-QAGTGQRPQGL- 124
Query: 116 IKKMPAAATIPANSSDAPFIRPGPGTL 142
A S + P RP GTL
Sbjct: 125 -----------AESGEEPLPRPCQGTL 140
>gi|156766068 CDC42 binding protein kinase gamma (DMPK-like) [Homo
sapiens]
Length = 1551
Score = 30.8 bits (68), Expect = 2.4
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 57 DLPPGGS--QDGDLKEPTERVTRDLSSGAPRGRNLPAPDQPQPPLQRGTRLRLRQRRRRL 114
D PP GS QD DL++ +R+ R+L+ G L A +Q Q G + L QR +
Sbjct: 474 DGPPAGSPGQDSDLRQELDRLHRELAEGR---AGLQAQEQELCRAQ-GQQEELLQRLQEA 529
Query: 115 LIKKMPAAATIPANSSDAPFIRPGPGTLDGRWVSLHR 151
++ A+ A SS R L+ + SL R
Sbjct: 530 QEREAATASQTRALSSQLEEARAAQRELEAQVSSLSR 566
>gi|169214061 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 30.4 bits (67), Expect = 3.2
Identities = 36/125 (28%), Positives = 49/125 (39%), Gaps = 19/125 (15%)
Query: 69 KEPTERVTRDLSSGAP-RGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMPAAATI-- 125
K P R + + P R R P +P+ R RQRRR+ ++ A T+
Sbjct: 142 KGPRSRRAAEFTQARPTRKRRTPGGGRPEAGCWLENR---RQRRRKAGAERAGAGPTLTP 198
Query: 126 --PANSSD--------APFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYR---ASSS 172
PA S D AP P G+W L R + ER +C+ R AS S
Sbjct: 199 PLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRPERAAGSAGSCSSRRALPASGS 258
Query: 173 RRAVT 177
A+T
Sbjct: 259 GAAMT 263
>gi|169214437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 30.4 bits (67), Expect = 3.2
Identities = 36/125 (28%), Positives = 49/125 (39%), Gaps = 19/125 (15%)
Query: 69 KEPTERVTRDLSSGAP-RGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMPAAATI-- 125
K P R + + P R R P +P+ R RQRRR+ ++ A T+
Sbjct: 142 KGPRSRRAAEFTQARPTRKRRTPGGGRPEAGCWLENR---RQRRRKAGAERAGAGPTLTP 198
Query: 126 --PANSSD--------APFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYR---ASSS 172
PA S D AP P G+W L R + ER +C+ R AS S
Sbjct: 199 PLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRPERAAGSAGSCSSRRALPASGS 258
Query: 173 RRAVT 177
A+T
Sbjct: 259 GAAMT 263
>gi|169213353 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 30.4 bits (67), Expect = 3.2
Identities = 36/125 (28%), Positives = 49/125 (39%), Gaps = 19/125 (15%)
Query: 69 KEPTERVTRDLSSGAP-RGRNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKKMPAAATI-- 125
K P R + + P R R P +P+ R RQRRR+ ++ A T+
Sbjct: 142 KGPRSRRAAEFTQARPTRKRRTPGGGRPEAGCWLENR---RQRRRKAGAERAGAGPTLTP 198
Query: 126 --PANSSD--------APFIRPGPGTLDGRWVSLHRSQQERKRVMQEACAKYR---ASSS 172
PA S D AP P G+W L R + ER +C+ R AS S
Sbjct: 199 PLPAGSPDPPSPAATAAPQPEQRPHLSRGQWRLLPRRRPERAAGSAGSCSSRRALPASGS 258
Query: 173 RRAVT 177
A+T
Sbjct: 259 GAAMT 263
>gi|105990541 ATP-binding cassette, sub-family A member 4 [Homo
sapiens]
Length = 2273
Score = 30.4 bits (67), Expect = 3.2
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Query: 27 LFISLQDPTELAPQQVPGIKFNIRPRQPHHDLPPGGSQDGDLKEPTERVTRDLSSGAPRG 86
+F+ + + ++ P G + P H + G + + + + P G
Sbjct: 1272 IFLKVTEDSDSGPLFAGGAQQKRENVNPRHPCLGPREKAGQTPQDSNVCSPGAPAAHPEG 1331
Query: 87 RNLPAPDQPQPPLQRGTRLRLRQRRRRLLIKK 118
+ P P+ P P L GT+L L Q + LL+K+
Sbjct: 1332 QPPPEPECPGPQLNTGTQLVL-QHVQALLVKR 1362
>gi|41406050 docking protein 2 [Homo sapiens]
Length = 412
Score = 30.4 bits (67), Expect = 3.2
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 151 RSQQERKRVMQEACAKYRASSSRRAVTPRHVSRIFVEDRHRVLYCEVPKAGCSNWKRVLM 210
R + RK + C + A + A +PR S F+E + R+ P A +W + +
Sbjct: 52 RCEAARKVIRLSDCLRV-AEAGGEASSPRDTSAFFLETKERLYLLAAPAAERGDWVQAIC 110
Query: 211 VLA 213
+LA
Sbjct: 111 LLA 113
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.138 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,317,173
Number of Sequences: 37866
Number of extensions: 867431
Number of successful extensions: 3648
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 3564
Number of HSP's gapped (non-prelim): 127
length of query: 424
length of database: 18,247,518
effective HSP length: 105
effective length of query: 319
effective length of database: 14,271,588
effective search space: 4552636572
effective search space used: 4552636572
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.