Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 19923913
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|19923913 transmembrane protein 169 [Homo sapiens]
(297 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|214831834 transmembrane protein 169 [Homo sapiens] 614 e-176
gi|19923913 transmembrane protein 169 [Homo sapiens] 614 e-176
gi|214831799 transmembrane protein 169 [Homo sapiens] 614 e-176
gi|214831780 transmembrane protein 169 [Homo sapiens] 614 e-176
gi|20149304 ISY1 splicing factor homolog [Homo sapiens] 37 0.021
gi|4557543 extracellular matrix protein 2 precursor [Homo sapiens] 36 0.036
gi|38788260 bromodomain PHD finger transcription factor isoform ... 36 0.047
gi|38788274 bromodomain PHD finger transcription factor isoform ... 36 0.047
gi|23957698 luman-recruiting factor [Homo sapiens] 34 0.18
gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens] 33 0.30
gi|150417986 ADP-ribosylation factor guanine nucleotide-exchange... 33 0.30
gi|237858679 neurofascin isoform 3 precursor [Homo sapiens] 32 0.52
gi|237858677 neurofascin isoform 2 precursor [Homo sapiens] 32 0.52
gi|89903008 neurofascin isoform 4 precursor [Homo sapiens] 32 0.52
gi|55956788 nucleolin [Homo sapiens] 32 0.52
gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens] 32 0.52
gi|237858675 neurofascin isoform 1 precursor [Homo sapiens] 32 0.52
gi|55749531 splicing factor 3B subunit 2 [Homo sapiens] 32 0.52
gi|21327708 nucleosome assembly protein 1-like 1 [Homo sapiens] 32 0.67
gi|4758756 nucleosome assembly protein 1-like 1 [Homo sapiens] 32 0.67
gi|57528117 SPANX family, member N4 [Homo sapiens] 32 0.67
gi|218505694 potassium channel tetramerisation domain containing... 32 0.67
gi|13540547 solute carrier family 2 member 10 [Homo sapiens] 32 0.67
gi|115529475 polymerase (RNA) III (DNA directed) polypeptide G (... 31 1.1
gi|76150625 nucleolar protein 1, 120kDa [Homo sapiens] 31 1.1
gi|76150623 nucleolar protein 1, 120kDa [Homo sapiens] 31 1.1
gi|7656938 CREBBP/EP300 inhibitor 1 [Homo sapiens] 31 1.5
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 31 1.5
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 31 1.5
gi|126723564 pecanex-like 1 [Homo sapiens] 31 1.5
>gi|214831834 transmembrane protein 169 [Homo sapiens]
Length = 297
Score = 614 bits (1583), Expect = e-176
Identities = 297/297 (100%), Positives = 297/297 (100%)
Query: 1 MEEPTAVEGQVQLPSPHQGSLRKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDNE 60
MEEPTAVEGQVQLPSPHQGSLRKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDNE
Sbjct: 1 MEEPTAVEGQVQLPSPHQGSLRKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDNE 60
Query: 61 KTDEEPGESEGGDQPKEEEGDDFLDYPVDDDMWNLPLDSRYVTLTGTITRGKKKGQMVDI 120
KTDEEPGESEGGDQPKEEEGDDFLDYPVDDDMWNLPLDSRYVTLTGTITRGKKKGQMVDI
Sbjct: 61 KTDEEPGESEGGDQPKEEEGDDFLDYPVDDDMWNLPLDSRYVTLTGTITRGKKKGQMVDI 120
Query: 121 HVTLTEKELQELTKPKESSRETTPEGRMACQMGADRGPHVVLWTLICLPVVFILSFVVSF 180
HVTLTEKELQELTKPKESSRETTPEGRMACQMGADRGPHVVLWTLICLPVVFILSFVVSF
Sbjct: 121 HVTLTEKELQELTKPKESSRETTPEGRMACQMGADRGPHVVLWTLICLPVVFILSFVVSF 180
Query: 181 YYGTITWYNIFLVYNEERTFWHKISYCPCLVLFYPVLIMAMASSLGLYAAVVQLSWSWEA 240
YYGTITWYNIFLVYNEERTFWHKISYCPCLVLFYPVLIMAMASSLGLYAAVVQLSWSWEA
Sbjct: 181 YYGTITWYNIFLVYNEERTFWHKISYCPCLVLFYPVLIMAMASSLGLYAAVVQLSWSWEA 240
Query: 241 WWQAARDMEKGFCGWLCSKLGLEDCSPYSIVELLESDNISSTLSNKDPIQEVETSTV 297
WWQAARDMEKGFCGWLCSKLGLEDCSPYSIVELLESDNISSTLSNKDPIQEVETSTV
Sbjct: 241 WWQAARDMEKGFCGWLCSKLGLEDCSPYSIVELLESDNISSTLSNKDPIQEVETSTV 297
>gi|19923913 transmembrane protein 169 [Homo sapiens]
Length = 297
Score = 614 bits (1583), Expect = e-176
Identities = 297/297 (100%), Positives = 297/297 (100%)
Query: 1 MEEPTAVEGQVQLPSPHQGSLRKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDNE 60
MEEPTAVEGQVQLPSPHQGSLRKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDNE
Sbjct: 1 MEEPTAVEGQVQLPSPHQGSLRKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDNE 60
Query: 61 KTDEEPGESEGGDQPKEEEGDDFLDYPVDDDMWNLPLDSRYVTLTGTITRGKKKGQMVDI 120
KTDEEPGESEGGDQPKEEEGDDFLDYPVDDDMWNLPLDSRYVTLTGTITRGKKKGQMVDI
Sbjct: 61 KTDEEPGESEGGDQPKEEEGDDFLDYPVDDDMWNLPLDSRYVTLTGTITRGKKKGQMVDI 120
Query: 121 HVTLTEKELQELTKPKESSRETTPEGRMACQMGADRGPHVVLWTLICLPVVFILSFVVSF 180
HVTLTEKELQELTKPKESSRETTPEGRMACQMGADRGPHVVLWTLICLPVVFILSFVVSF
Sbjct: 121 HVTLTEKELQELTKPKESSRETTPEGRMACQMGADRGPHVVLWTLICLPVVFILSFVVSF 180
Query: 181 YYGTITWYNIFLVYNEERTFWHKISYCPCLVLFYPVLIMAMASSLGLYAAVVQLSWSWEA 240
YYGTITWYNIFLVYNEERTFWHKISYCPCLVLFYPVLIMAMASSLGLYAAVVQLSWSWEA
Sbjct: 181 YYGTITWYNIFLVYNEERTFWHKISYCPCLVLFYPVLIMAMASSLGLYAAVVQLSWSWEA 240
Query: 241 WWQAARDMEKGFCGWLCSKLGLEDCSPYSIVELLESDNISSTLSNKDPIQEVETSTV 297
WWQAARDMEKGFCGWLCSKLGLEDCSPYSIVELLESDNISSTLSNKDPIQEVETSTV
Sbjct: 241 WWQAARDMEKGFCGWLCSKLGLEDCSPYSIVELLESDNISSTLSNKDPIQEVETSTV 297
>gi|214831799 transmembrane protein 169 [Homo sapiens]
Length = 297
Score = 614 bits (1583), Expect = e-176
Identities = 297/297 (100%), Positives = 297/297 (100%)
Query: 1 MEEPTAVEGQVQLPSPHQGSLRKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDNE 60
MEEPTAVEGQVQLPSPHQGSLRKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDNE
Sbjct: 1 MEEPTAVEGQVQLPSPHQGSLRKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDNE 60
Query: 61 KTDEEPGESEGGDQPKEEEGDDFLDYPVDDDMWNLPLDSRYVTLTGTITRGKKKGQMVDI 120
KTDEEPGESEGGDQPKEEEGDDFLDYPVDDDMWNLPLDSRYVTLTGTITRGKKKGQMVDI
Sbjct: 61 KTDEEPGESEGGDQPKEEEGDDFLDYPVDDDMWNLPLDSRYVTLTGTITRGKKKGQMVDI 120
Query: 121 HVTLTEKELQELTKPKESSRETTPEGRMACQMGADRGPHVVLWTLICLPVVFILSFVVSF 180
HVTLTEKELQELTKPKESSRETTPEGRMACQMGADRGPHVVLWTLICLPVVFILSFVVSF
Sbjct: 121 HVTLTEKELQELTKPKESSRETTPEGRMACQMGADRGPHVVLWTLICLPVVFILSFVVSF 180
Query: 181 YYGTITWYNIFLVYNEERTFWHKISYCPCLVLFYPVLIMAMASSLGLYAAVVQLSWSWEA 240
YYGTITWYNIFLVYNEERTFWHKISYCPCLVLFYPVLIMAMASSLGLYAAVVQLSWSWEA
Sbjct: 181 YYGTITWYNIFLVYNEERTFWHKISYCPCLVLFYPVLIMAMASSLGLYAAVVQLSWSWEA 240
Query: 241 WWQAARDMEKGFCGWLCSKLGLEDCSPYSIVELLESDNISSTLSNKDPIQEVETSTV 297
WWQAARDMEKGFCGWLCSKLGLEDCSPYSIVELLESDNISSTLSNKDPIQEVETSTV
Sbjct: 241 WWQAARDMEKGFCGWLCSKLGLEDCSPYSIVELLESDNISSTLSNKDPIQEVETSTV 297
>gi|214831780 transmembrane protein 169 [Homo sapiens]
Length = 297
Score = 614 bits (1583), Expect = e-176
Identities = 297/297 (100%), Positives = 297/297 (100%)
Query: 1 MEEPTAVEGQVQLPSPHQGSLRKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDNE 60
MEEPTAVEGQVQLPSPHQGSLRKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDNE
Sbjct: 1 MEEPTAVEGQVQLPSPHQGSLRKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDNE 60
Query: 61 KTDEEPGESEGGDQPKEEEGDDFLDYPVDDDMWNLPLDSRYVTLTGTITRGKKKGQMVDI 120
KTDEEPGESEGGDQPKEEEGDDFLDYPVDDDMWNLPLDSRYVTLTGTITRGKKKGQMVDI
Sbjct: 61 KTDEEPGESEGGDQPKEEEGDDFLDYPVDDDMWNLPLDSRYVTLTGTITRGKKKGQMVDI 120
Query: 121 HVTLTEKELQELTKPKESSRETTPEGRMACQMGADRGPHVVLWTLICLPVVFILSFVVSF 180
HVTLTEKELQELTKPKESSRETTPEGRMACQMGADRGPHVVLWTLICLPVVFILSFVVSF
Sbjct: 121 HVTLTEKELQELTKPKESSRETTPEGRMACQMGADRGPHVVLWTLICLPVVFILSFVVSF 180
Query: 181 YYGTITWYNIFLVYNEERTFWHKISYCPCLVLFYPVLIMAMASSLGLYAAVVQLSWSWEA 240
YYGTITWYNIFLVYNEERTFWHKISYCPCLVLFYPVLIMAMASSLGLYAAVVQLSWSWEA
Sbjct: 181 YYGTITWYNIFLVYNEERTFWHKISYCPCLVLFYPVLIMAMASSLGLYAAVVQLSWSWEA 240
Query: 241 WWQAARDMEKGFCGWLCSKLGLEDCSPYSIVELLESDNISSTLSNKDPIQEVETSTV 297
WWQAARDMEKGFCGWLCSKLGLEDCSPYSIVELLESDNISSTLSNKDPIQEVETSTV
Sbjct: 241 WWQAARDMEKGFCGWLCSKLGLEDCSPYSIVELLESDNISSTLSNKDPIQEVETSTV 297
>gi|20149304 ISY1 splicing factor homolog [Homo sapiens]
Length = 285
Score = 37.0 bits (84), Expect = 0.021
Identities = 18/68 (26%), Positives = 34/68 (50%)
Query: 11 VQLPSPHQGSLRKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDNEKTDEEPGESE 70
V L ++ LR + + E+ + +K+ +E E I IY E++DEE + +
Sbjct: 171 VPLEQEYEKKLRAELVEKWKAEREARLARGEKEEEEEEEEEINIYAVTEEESDEEGSQEK 230
Query: 71 GGDQPKEE 78
GGD +++
Sbjct: 231 GGDDSQQK 238
>gi|4557543 extracellular matrix protein 2 precursor [Homo sapiens]
Length = 699
Score = 36.2 bits (82), Expect = 0.036
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 32 DGESTMGHRKKKRKESRPESIIIYRSDNEKTDEEPGESEGGDQPKEEEGDDFLDYPVDDD 91
+G+S G RK++ E R + R E+ ++E E E G++ +E+E D PV D
Sbjct: 242 EGDSRGGDRKQRPGEERRLAHQQQRQGREEEEDEEEEGEEGEEDEEDEED-----PVRGD 296
Query: 92 MWNLP 96
M+ +P
Sbjct: 297 MFRMP 301
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 35.8 bits (81), Expect = 0.047
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 19 GSLRKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDNEKTD-EEPGESEGGDQPKE 77
G L + AA A++ H ++ +E E ++ + E D EE +SE ++ +
Sbjct: 109 GHLARTTAARRAVNKVVYDDHESEEEEEE--EDMVSEEEEEEDGDAEETQDSEDDEEDEM 166
Query: 78 EEGDDFLDYPV----DDDMWNLPLDSRYVT-LTGTITRGKKKGQMVDIH----VTLTEKE 128
EE DD DYP DDD + +S + + T + T G++K + +H L EK+
Sbjct: 167 EEDDDDSDYPEEMEDDDDDASYCTESSFRSHSTYSSTPGRRKPR---VHRPRSPILEEKD 223
Query: 129 LQELTKPKESSRETTP 144
+ L PK S P
Sbjct: 224 IPPLEFPKSSEDLMVP 239
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 35.8 bits (81), Expect = 0.047
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 19 GSLRKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDNEKTD-EEPGESEGGDQPKE 77
G L + AA A++ H ++ +E E ++ + E D EE +SE ++ +
Sbjct: 109 GHLARTTAARRAVNKVVYDDHESEEEEEE--EDMVSEEEEEEDGDAEETQDSEDDEEDEM 166
Query: 78 EEGDDFLDYPV----DDDMWNLPLDSRYVT-LTGTITRGKKKGQMVDIH----VTLTEKE 128
EE DD DYP DDD + +S + + T + T G++K + +H L EK+
Sbjct: 167 EEDDDDSDYPEEMEDDDDDASYCTESSFRSHSTYSSTPGRRKPR---VHRPRSPILEEKD 223
Query: 129 LQELTKPKESSRETTP 144
+ L PK S P
Sbjct: 224 IPPLEFPKSSEDLMVP 239
>gi|23957698 luman-recruiting factor [Homo sapiens]
Length = 639
Score = 33.9 bits (76), Expect = 0.18
Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 38/181 (20%)
Query: 14 PSPHQGSLRKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDN------------EK 61
P P +G A + +L +++ +K++E + ++ SDN ++
Sbjct: 302 PLPQEGPGSLAAGESSSLSASTSVSDSSQKKEE---HNYSLFVSDNLGEQPTKCSPEEDE 358
Query: 62 TDEEPGESEGGDQ------------PKEEEGDDFLDYPVDD--DMWNLP-------LDSR 100
DEE + E D+ +EEE +D+ D DD D ++ P D +
Sbjct: 359 EDEEDVDDEDHDEGFGSEHELSENEEEEEEEEDYEDDKDDDISDTFSEPGYENDSVEDLK 418
Query: 101 YVTLTGTITRGKKKGQMVDIHVTLTEKELQELTKPKESSRETTPEGRMACQMGADRGPHV 160
VT + RGK++ + LT + + + +P E +R+T P M + G G +
Sbjct: 419 EVTSISSRKRGKRR-YFWEYSEQLTPSQQERMLRPSEWNRDTLP-SNMYQKNGLHHGKYA 476
Query: 161 V 161
V
Sbjct: 477 V 477
>gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]
Length = 1390
Score = 33.1 bits (74), Expect = 0.30
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 54 IYRSDNEKTDEEPG----ESEGGDQPKEEEGDDFLDYPVDDD 91
I R+D E TD + G EG DQ E++G+D D DDD
Sbjct: 227 IQRTDEETTDNQEGSVESSEEGEDQEHEDDGEDEDDEDDDDD 268
>gi|150417986 ADP-ribosylation factor guanine nucleotide-exchange
factor 2 [Homo sapiens]
Length = 1785
Score = 33.1 bits (74), Expect = 0.30
Identities = 33/137 (24%), Positives = 54/137 (39%), Gaps = 9/137 (6%)
Query: 5 TAVEGQV-----QLPSPHQGSLRKAVAAALALDGEST-MGHRKKKRKESRPESIIIYRSD 58
T +E QV +L P Q + V A A+ + + H + + K + PE + +
Sbjct: 195 TRMENQVLQEARELEKPIQSKPQSPVIQAAAVSPKFVRLKHSQAQSKPTTPEKTDLTNGE 254
Query: 59 NEKTDEEPGESEGGDQPKEEEGDDFLDYPVDDDMWNLPLDSRYVTLTGTITRGKKKGQMV 118
+ ++D +E GD P+ E G DD + D +T I +K +
Sbjct: 255 HARSDSGKVSTENGDAPR-ERGSSLSG--TDDGAQEVVKDILEDVVTSAIKEAAEKHGLT 311
Query: 119 DIHVTLTEKELQELTKP 135
+ L E E QE P
Sbjct: 312 EPERVLGELECQECAIP 328
>gi|237858679 neurofascin isoform 3 precursor [Homo sapiens]
Length = 1174
Score = 32.3 bits (72), Expect = 0.52
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 19/88 (21%)
Query: 71 GGDQPKEEEGDDFLDYPVDDDMWNLPLDSRYVTLTGTITRGKKKGQMVDIHV-------- 122
G + PKEE+G DY +D N PL +L GTI + + +VD
Sbjct: 1084 GPEDPKEEDGS--FDYSDED---NKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNE 1138
Query: 123 ------TLTEKELQELTKPKESSRETTP 144
T K+ +E T+ ESS T+P
Sbjct: 1139 DGSFIGQYTVKKDKEETEGNESSEATSP 1166
>gi|237858677 neurofascin isoform 2 precursor [Homo sapiens]
Length = 1189
Score = 32.3 bits (72), Expect = 0.52
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 19/88 (21%)
Query: 71 GGDQPKEEEGDDFLDYPVDDDMWNLPLDSRYVTLTGTITRGKKKGQMVDIHV-------- 122
G + PKEE+G DY +D N PL +L GTI + + +VD
Sbjct: 1099 GPEDPKEEDGS--FDYSDED---NKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNE 1153
Query: 123 ------TLTEKELQELTKPKESSRETTP 144
T K+ +E T+ ESS T+P
Sbjct: 1154 DGSFIGQYTVKKDKEETEGNESSEATSP 1181
>gi|89903008 neurofascin isoform 4 precursor [Homo sapiens]
Length = 1169
Score = 32.3 bits (72), Expect = 0.52
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 19/88 (21%)
Query: 71 GGDQPKEEEGDDFLDYPVDDDMWNLPLDSRYVTLTGTITRGKKKGQMVDIHV-------- 122
G + PKEE+G DY +D N PL +L GTI + + +VD
Sbjct: 1079 GPEDPKEEDGS--FDYSDED---NKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNE 1133
Query: 123 ------TLTEKELQELTKPKESSRETTP 144
T K+ +E T+ ESS T+P
Sbjct: 1134 DGSFIGQYTVKKDKEETEGNESSEATSP 1161
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 32.3 bits (72), Expect = 0.52
Identities = 30/124 (24%), Positives = 46/124 (37%), Gaps = 14/124 (11%)
Query: 11 VQLPSPHQGSLRKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDNEKTDEEPGESE 70
V P + KA+ A G + K K ++ E D+ + DEE E E
Sbjct: 104 VTTPGKKGATPGKALVATPGKKGAAIPAKGAKNGKNAKKEDSDEEEDDDSEEDEEDDEDE 163
Query: 71 GGDQ--------------PKEEEGDDFLDYPVDDDMWNLPLDSRYVTLTGTITRGKKKGQ 116
D+ P E+ DD D +DD + DS + T +GKK +
Sbjct: 164 DEDEDEIEPAAMKAAAAAPASEDEDDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKAAK 223
Query: 117 MVDI 120
+V +
Sbjct: 224 VVPV 227
>gi|169202818 PREDICTED: similar to hCG1991922 [Homo sapiens]
Length = 488
Score = 32.3 bits (72), Expect = 0.52
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 40 RKKKRKESRPESIIIYRSDNEKTDEEPGESEGGDQPKEEEGDD 82
+KKK +E E D E+ +E E E D+ +EE+GDD
Sbjct: 318 KKKKEEEENEED----EEDEEEEKDEEDEDEEDDEDEEEDGDD 356
>gi|237858675 neurofascin isoform 1 precursor [Homo sapiens]
Length = 1240
Score = 32.3 bits (72), Expect = 0.52
Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 19/88 (21%)
Query: 71 GGDQPKEEEGDDFLDYPVDDDMWNLPLDSRYVTLTGTITRGKKKGQMVDIHV-------- 122
G + PKEE+G DY +D N PL +L GTI + + +VD
Sbjct: 1150 GPEDPKEEDGS--FDYSDED---NKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNE 1204
Query: 123 ------TLTEKELQELTKPKESSRETTP 144
T K+ +E T+ ESS T+P
Sbjct: 1205 DGSFIGQYTVKKDKEETEGNESSEATSP 1232
>gi|55749531 splicing factor 3B subunit 2 [Homo sapiens]
Length = 895
Score = 32.3 bits (72), Expect = 0.52
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 65 EPGESEGGDQPKEEEGDDFLDYPVDDDMWNLPLDSRYVTLTG--TITRGKKKGQMVDIHV 122
EP + E ++ +EEE D+ D P D+ + P DS +T G ++ G + ++++
Sbjct: 712 EPSDEESSEEEEEEESDE--DKP-DETGFITPADSGLITPGGFSSVPAGMETPELIE--- 765
Query: 123 TLTEKELQELTKPKESSRETT--PEGRMACQMGADRG 157
L +K+++E E+ + T PE R A GA G
Sbjct: 766 -LRKKKIEEAMDGSETPQLFTVLPEKRTATVGGAMMG 801
>gi|21327708 nucleosome assembly protein 1-like 1 [Homo sapiens]
Length = 391
Score = 32.0 bits (71), Expect = 0.67
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 16 PHQGSLRKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDNEKTDEEPGESEG--GD 73
P G L A LA D E +GH ++R P S++ + + + D++ + EG D
Sbjct: 307 PESGDLDDDAEAILAADFE--IGHFLRER--IIPRSVLYFTGEAIEDDDDDYDEEGEEAD 362
Query: 74 QPKEEEGDDFLDYPVD 89
+ EEEGD+ D D
Sbjct: 363 EEGEEEGDEENDPDYD 378
>gi|4758756 nucleosome assembly protein 1-like 1 [Homo sapiens]
Length = 391
Score = 32.0 bits (71), Expect = 0.67
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 16 PHQGSLRKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDNEKTDEEPGESEG--GD 73
P G L A LA D E +GH ++R P S++ + + + D++ + EG D
Sbjct: 307 PESGDLDDDAEAILAADFE--IGHFLRER--IIPRSVLYFTGEAIEDDDDDYDEEGEEAD 362
Query: 74 QPKEEEGDDFLDYPVD 89
+ EEEGD+ D D
Sbjct: 363 EEGEEEGDEENDPDYD 378
>gi|57528117 SPANX family, member N4 [Homo sapiens]
Length = 99
Score = 32.0 bits (71), Expect = 0.67
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 1 MEEPTAVEGQVQLPSPHQGSLRKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDNE 60
MEEPT+ + ++ SP + + RK L S K+ ++++ +++ Y N+
Sbjct: 1 MEEPTSSTNENKMKSPCESNKRKVDKKKKNLHRASAPEQSLKETEKAKYPTLVFYCRKNK 60
Query: 61 KTD----EEPGESEGGDQPKEEEGD 81
K + E +E P +E+GD
Sbjct: 61 KRNSNQLENNQPTESSTDPIKEKGD 85
>gi|218505694 potassium channel tetramerisation domain containing 1
isoform b [Homo sapiens]
Length = 865
Score = 32.0 bits (71), Expect = 0.67
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 20/96 (20%)
Query: 19 GSLRKAVAAALALDGESTMGHRK---KKRKESRPESIIIYRSDNEKTDEEPGESE----- 70
G A AAA +GE G R + R+ SRP Y S E+ +EE E E
Sbjct: 15 GGSASAAAAAAENNGERGEGERGAGGRGRRHSRPH----YCSAGEEEEEEEEEDEIQEVQ 70
Query: 71 -GGDQPKEEEGDDFLDYPVDDDM-------WNLPLD 98
GD+ +EE+G L+ +++ W+ PL+
Sbjct: 71 ITGDEEEEEDGGGGLEEDEEEEEEEEMGLDWDEPLE 106
>gi|13540547 solute carrier family 2 member 10 [Homo sapiens]
Length = 541
Score = 32.0 bits (71), Expect = 0.67
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 11/104 (10%)
Query: 133 TKPKESSRETTPEGRMACQMGAD------RGPHVVLWTLICLPVVFILSFVVSFYYGTIT 186
TKP S + + R+A RG ++ WT + +VF+ +F SF +G +T
Sbjct: 374 TKPHPRSGDPSAPPRLALSSALPGPPLPARGHALLRWTALLCLMVFVSAF--SFGFGPVT 431
Query: 187 WYNIFLVYNEE---RTFWHKISYCPCLVLFYPVLIMAMASSLGL 227
W + +Y E R F S+ LF + + + ++GL
Sbjct: 432 WLVLSEIYPVEIRGRAFAFCNSFNWAANLFISLSFLDLIGTIGL 475
>gi|115529475 polymerase (RNA) III (DNA directed) polypeptide G
(32kD) [Homo sapiens]
Length = 223
Score = 31.2 bits (69), Expect = 1.1
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 7/36 (19%)
Query: 56 RSDNEKTDEEPGESEGGDQPKEEEGDDFLDYPVDDD 91
R D EK+DEE E EG + K +EGDD DDD
Sbjct: 151 RGDGEKSDEENEEKEGSKE-KSKEGDD------DDD 179
>gi|76150625 nucleolar protein 1, 120kDa [Homo sapiens]
Length = 808
Score = 31.2 bits (69), Expect = 1.1
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 32 DGESTMGHRKKKRKESRPESIIIYRSDNEKTDEEPGESEGGDQ---PKEEEGDDFLDYPV 88
+GE+ + + RK+ E+ + E+T++E E E + PK EE D L V
Sbjct: 151 EGEALLPIERAARKQKAREAAAGIQWSEEETEDEEEEKEVTPESGPPKVEEADGGLQINV 210
Query: 89 DDDMWNLP 96
D++ + LP
Sbjct: 211 DEEPFVLP 218
>gi|76150623 nucleolar protein 1, 120kDa [Homo sapiens]
Length = 808
Score = 31.2 bits (69), Expect = 1.1
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 32 DGESTMGHRKKKRKESRPESIIIYRSDNEKTDEEPGESEGGDQ---PKEEEGDDFLDYPV 88
+GE+ + + RK+ E+ + E+T++E E E + PK EE D L V
Sbjct: 151 EGEALLPIERAARKQKAREAAAGIQWSEEETEDEEEEKEVTPESGPPKVEEADGGLQINV 210
Query: 89 DDDMWNLP 96
D++ + LP
Sbjct: 211 DEEPFVLP 218
>gi|7656938 CREBBP/EP300 inhibitor 1 [Homo sapiens]
Length = 187
Score = 30.8 bits (68), Expect = 1.5
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 9 GQVQLPSPHQGS------LRKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDNEKT 62
G+ LP GS LR + + A L+ E M ++ + + PE ++
Sbjct: 24 GEGDLPQMEVGSGSRELSLRPSRSGAQQLEEEGPM-EEEEAQPMAAPEGKRSL-ANGPNA 81
Query: 63 DEEPGESEGGDQPKEEEGDDFLDYPVDDD 91
E+PG+ G D E+EG++F D+ D D
Sbjct: 82 GEQPGQVAGADFESEDEGEEFDDWEDDYD 110
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 30.8 bits (68), Expect = 1.5
Identities = 18/61 (29%), Positives = 34/61 (55%)
Query: 22 RKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDNEKTDEEPGESEGGDQPKEEEGD 81
R A A L + S +K++R + + +S +S++E+ +EE E E ++ +EEE +
Sbjct: 1367 RSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEE 1426
Query: 82 D 82
D
Sbjct: 1427 D 1427
>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 30.8 bits (68), Expect = 1.5
Identities = 18/61 (29%), Positives = 34/61 (55%)
Query: 22 RKAVAAALALDGESTMGHRKKKRKESRPESIIIYRSDNEKTDEEPGESEGGDQPKEEEGD 81
R A A L + S +K++R + + +S +S++E+ +EE E E ++ +EEE +
Sbjct: 1405 RSAKKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEE 1464
Query: 82 D 82
D
Sbjct: 1465 D 1465
>gi|126723564 pecanex-like 1 [Homo sapiens]
Length = 2341
Score = 30.8 bits (68), Expect = 1.5
Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 14/136 (10%)
Query: 168 LPVVFILSFVVSFYYGTITWYNIFLVYNEERTFWHKI---SYCPCLVLFYPVL--IMAMA 222
L +VF L F + F+ G + N F++Y E+ H + L Y + I+A+A
Sbjct: 1116 LVIVFTLCFPIVFFIGLLPQVNTFVMYLCEQLDIHIFGGNATTSLLAALYSFICSIVAVA 1175
Query: 223 SSLGLYAAVVQLSWSWEAWWQAARDMEKGFCGWLCS---KLGLEDCSPYSIVELLESDNI 279
GL ++ SW Q + FCG L + L + P + L++S
Sbjct: 1176 LLYGLCYGALKDSWD----GQHIPVLFSIFCGLLVAVSYHLSRQSSDPSVLFSLVQSKIF 1231
Query: 280 SST--LSNKDPIQEVE 293
T + +DP+ EV+
Sbjct: 1232 PKTEEKNPEDPLSEVK 1247
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,357,562
Number of Sequences: 37866
Number of extensions: 582001
Number of successful extensions: 3523
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 3316
Number of HSP's gapped (non-prelim): 226
length of query: 297
length of database: 18,247,518
effective HSP length: 102
effective length of query: 195
effective length of database: 14,385,186
effective search space: 2805111270
effective search space used: 2805111270
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.