Guide to the Human Genome
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Name: TOR2A Sequence: fasta or formatted (242aa) NCBI GI: 197313700
Description:

torsin family 2, member A isoform c

Referenced in:

Additional Brain Proteins

Other entries for this name:
alt prot [253aa] torsin family 2, member A isoform b
alt prot [321aa] torsin family 2, member A isoform a
alt prot [72aa] torsin family 2, member A isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.4         30           5
 C cysteine            2.5          6           1
 D aspartate           3.3          8           1
 E glutamate           2.1          5           1
 F phenylalanine       4.5         11           1
 G glycine             9.9         24           2
 H histidine           4.5         11           2
 I isoleucine          1.7          4           1
 K lysine              5.0         12           2
 L leucine            14.5         35           2
 M methionine          1.7          4           1
 N asparagine          0.8          2           1
 P proline             9.1         22           2
 Q glutamine           2.1          5           1
 R arginine            7.4         18           2
 S serine              6.2         15           2
 T threonine           2.9          7           1
 V valine              5.0         12           2
 W tryptophan          2.5          6           1
 Y tyrosine            2.1          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   torsin family 2, member A isoform c 
TOR2A                 0.817   torsin family 2, member A isoform b 
TOR2A                 0.803   torsin family 2, member A isoform a 
TOR1A                 0.299   torsin A 
TOR1B                 0.278   torsin family 1, member B (torsin B) 
TOR3A                 0.210   torsin family 3, member A 
TOR2A                 0.172   torsin family 2, member A isoform d 
C9orf167              0.058   hypothetical protein LOC54863 
DRD4                  0.025   dopamine receptor D4 
ZNF48                 0.017   zinc finger protein 48 
TBC1D10B              0.017   TBC1 domain family, member 10B 
TRIM71                0.017   tripartite motif-containing 71 
GPN1                  0.015   GPN-loop GTPase 1 isoform a 
LEMD2                 0.015   LEM domain containing 2 isoform 1 
GLTSCR1               0.015   glioma tumor suppressor candidate region gene 1 [Ho...
TRDN                  0.015   triadin 
APC2                  0.015   adenomatosis polyposis coli 2 
PUS1                  0.012   pseudouridine synthase 1 isoform 1 
CLPB                  0.012   caseinolytic peptidase B 
C9orf75               0.012   hypothetical protein LOC286262 isoform 2 
C9orf75               0.012   hypothetical protein LOC286262 isoform 1 
LOC100133554          0.012   PREDICTED: hypothetical protein 
LOC100133554          0.012   PREDICTED: hypothetical protein 
WIPF3                 0.012   WAS/WASL interacting protein family, member 3 [Homo...
FOXQ1                 0.010   forkhead box Q1 
ARTN                  0.010   neurotrophic factor artemin isoform 2 
ARTN                  0.010   neurotrophic factor artemin isoform 1 precursor [Ho...
ARTN                  0.010   neurotrophic factor artemin isoform 3 precursor [Ho...
ARTN                  0.010   neurotrophic factor artemin isoform 1 precursor [Ho...
ARTN                  0.010   neurotrophic factor artemin isoform 3 precursor [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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