Guide to the Human Genome
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Name: DNAH12 Sequence: fasta or formatted (3092aa) NCBI GI: 194440727
Description:

dynein heavy chain domain 2 isoform 1

Referenced in:

Dynein and Dynactin

Other entries for this name:
alt prot [457aa] dynein heavy chain domain 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0        154           3
 C cysteine            1.7         54           1
 D aspartate           5.5        169           3
 E glutamate           7.9        245           3
 F phenylalanine       5.2        162           3
 G glycine             4.8        147           3
 H histidine           1.9         59           2
 I isoleucine          6.7        208           3
 K lysine              7.1        219           3
 L leucine            11.4        352           3
 M methionine          2.9         90           2
 N asparagine          4.4        137           2
 P proline             4.8        148           3
 Q glutamine           3.9        121           3
 R arginine            4.8        149           2
 S serine              5.8        178           2
 T threonine           5.5        171           2
 V valine              5.4        167           3
 W tryptophan          1.7         52           1
 Y tyrosine            3.6        110           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dynein heavy chain domain 2 isoform 1 
DNAH7                 0.332   dynein, axonemal, heavy chain 7 
DNAH3                 0.296   dynein, axonemal, heavy chain 3 
DNAH1                 0.236   dynein, axonemal, heavy chain 1 
DNAH6                 0.201   dynein, axonemal, heavy polypeptide 6 
DNAH2                 0.180   dynein heavy chain domain 3 
DNAH10                0.171   dynein, axonemal, heavy chain 10 
DNAH17                0.153   PREDICTED: dynein, axonemal, heavy chain 17 
DNAH9                 0.151   dynein, axonemal, heavy chain 9 isoform 2 
DNAH11                0.151   dynein, axonemal, heavy chain 11 
DNAH17                0.149   PREDICTED: dynein, axonemal, heavy chain 17 
DNAH17                0.149   PREDICTED: dynein, axonemal, heavy chain 17 
DNAH8                 0.144   dynein, axonemal, heavy polypeptide 8 
DNAH5                 0.143   dynein, axonemal, heavy chain 5 
DNAH12                0.140   dynein heavy chain domain 2 isoform 2 
DYNC1H1               0.111   cytoplasmic dynein 1 heavy chain 1 
DNAH14                0.107   dynein, axonemal, heavy polypeptide 14 isoform 1 [H...
DYNC2H1               0.093   dynein, cytoplasmic 2, heavy chain 1 
DNAH9                 0.066   dynein, axonemal, heavy chain 9 isoform 1 
DNHD1                 0.022   dynein heavy chain domain 1 isoform 1 
GOLGA4                0.005   golgi autoantigen, golgin subfamily a, 4 
LOC400352             0.004   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.004   PREDICTED: similar to Putative golgin subfamily A m...
LOC283685             0.004   PREDICTED: golgi autoantigen, golgin subfamily a-li...
TCHP                  0.004   trichoplein 
TCHP                  0.004   trichoplein 
LOC727832             0.004   golgi autoantigen, golgin subfamily a-like 
LOC283685             0.004   PREDICTED: golgi autoantigen, golgin subfamily a-li...
INCENP                0.004   inner centromere protein antigens 135/155kDa isofor...
MYH7                  0.004   myosin, heavy chain 7, cardiac muscle, beta 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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