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Search of human proteins with 194294552
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|194294552 S100 calcium binding protein A7-like 2 [Homo
sapiens]
(112 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|194294552 S100 calcium binding protein A7-like 2 [Homo sapiens] 231 7e-62
gi|28827815 S100 calcium binding protein A7-like 1 [Homo sapiens] 126 4e-30
gi|115298657 S100 calcium binding protein A7 [Homo sapiens] 120 2e-28
gi|5032057 S100 calcium binding protein A11 [Homo sapiens] 42 1e-04
gi|7657532 S100 calcium-binding protein A6 [Homo sapiens] 41 2e-04
gi|5174663 S100 calcium binding protein P [Homo sapiens] 41 2e-04
gi|4506773 S100 calcium-binding protein A9 [Homo sapiens] 40 3e-04
gi|4506761 S100 calcium binding protein A10 [Homo sapiens] 40 3e-04
gi|5454034 S100 calcium-binding protein, beta [Homo sapiens] 39 0.001
gi|5174661 S100 calcium binding protein A2 [Homo sapiens] 38 0.002
gi|122937510 sentan, cilia apical structure protein [Homo sapiens] 38 0.002
gi|5454032 S100 calcium binding protein A1 [Homo sapiens] 37 0.004
gi|150010678 S100 calcium binding protein Z [Homo sapiens] 35 0.013
gi|4506767 S100 calcium binding protein A5 [Homo sapiens] 35 0.013
gi|57864582 hornerin [Homo sapiens] 31 0.19
gi|20149675 EF-hand domain family, member D2 [Homo sapiens] 31 0.19
gi|5032059 S100 calcium-binding protein A12 [Homo sapiens] 31 0.24
gi|60097902 filaggrin [Homo sapiens] 30 0.32
gi|120587023 down-regulated in metastasis [Homo sapiens] 29 0.71
gi|89036565 PREDICTED: similar to Temporarily Assigned Gene name... 29 0.71
gi|66737374 S100 calcium binding protein A13 [Homo sapiens] 29 0.71
gi|66737372 S100 calcium binding protein A13 [Homo sapiens] 29 0.71
gi|66737370 S100 calcium binding protein A13 [Homo sapiens] 29 0.71
gi|66737368 S100 calcium binding protein A13 [Homo sapiens] 29 0.71
gi|5174659 S100 calcium binding protein A13 [Homo sapiens] 29 0.71
gi|62122917 filaggrin family member 2 [Homo sapiens] 29 0.92
gi|4757898 calbindin 3 [Homo sapiens] 28 1.2
gi|21614544 S100 calcium-binding protein A8 [Homo sapiens] 28 1.6
gi|192447423 frequenin homolog isoform 2 [Homo sapiens] 28 2.1
gi|17738308 frequenin homolog isoform 1 [Homo sapiens] 28 2.1
>gi|194294552 S100 calcium binding protein A7-like 2 [Homo sapiens]
Length = 112
Score = 231 bits (590), Expect = 7e-62
Identities = 112/112 (100%), Positives = 112/112 (100%)
Query: 1 MLPSSGFLKAKMNIPLGEKVMLDIVAMFRQYSGDDGRMDMPGLVNLMKENFPNFLSGCEK 60
MLPSSGFLKAKMNIPLGEKVMLDIVAMFRQYSGDDGRMDMPGLVNLMKENFPNFLSGCEK
Sbjct: 1 MLPSSGFLKAKMNIPLGEKVMLDIVAMFRQYSGDDGRMDMPGLVNLMKENFPNFLSGCEK 60
Query: 61 SDMDYLSNALEKKDDNKDKKVNYSEFLSLLGDITIDHHKIMHGVAPCSGGSQ 112
SDMDYLSNALEKKDDNKDKKVNYSEFLSLLGDITIDHHKIMHGVAPCSGGSQ
Sbjct: 61 SDMDYLSNALEKKDDNKDKKVNYSEFLSLLGDITIDHHKIMHGVAPCSGGSQ 112
>gi|28827815 S100 calcium binding protein A7-like 1 [Homo sapiens]
Length = 101
Score = 126 bits (316), Expect = 4e-30
Identities = 54/95 (56%), Positives = 74/95 (77%)
Query: 18 EKVMLDIVAMFRQYSGDDGRMDMPGLVNLMKENFPNFLSGCEKSDMDYLSNALEKKDDNK 77
E+ ++ ++ MF +Y+G DG+++ P L+ +MKENFPNFLS C+K + YL+ EKKD N+
Sbjct: 7 ERSIIGMIDMFHKYTGRDGKIEKPSLLTMMKENFPNFLSACDKKGIHYLATVFEKKDKNE 66
Query: 78 DKKVNYSEFLSLLGDITIDHHKIMHGVAPCSGGSQ 112
DKK+++SEFLSLLGDI D+HK HG APCSGGSQ
Sbjct: 67 DKKIDFSEFLSLLGDIAADYHKQSHGAAPCSGGSQ 101
>gi|115298657 S100 calcium binding protein A7 [Homo sapiens]
Length = 101
Score = 120 bits (302), Expect = 2e-28
Identities = 52/95 (54%), Positives = 73/95 (76%)
Query: 18 EKVMLDIVAMFRQYSGDDGRMDMPGLVNLMKENFPNFLSGCEKSDMDYLSNALEKKDDNK 77
E+ ++ ++ MF +Y+ D +++ P L+ +MKENFPNFLS C+K +YL++ EKKD N+
Sbjct: 7 ERSIIGMIDMFHKYTRRDDKIEKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNE 66
Query: 78 DKKVNYSEFLSLLGDITIDHHKIMHGVAPCSGGSQ 112
DKK+++SEFLSLLGDI D+HK HG APCSGGSQ
Sbjct: 67 DKKIDFSEFLSLLGDIATDYHKQSHGAAPCSGGSQ 101
>gi|5032057 S100 calcium binding protein A11 [Homo sapiens]
Length = 105
Score = 41.6 bits (96), Expect = 1e-04
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 10 AKMNIPLG-EKVMLDIVAMFRQYSGDDG---RMDMPGLVNLMKENFPNFLSGCEKSDMDY 65
AK++ P E+ + ++A+F++Y+G DG + ++ M F + D
Sbjct: 2 AKISSPTETERCIESLIAVFQKYAGKDGYNYTLSKTEFLSFMNTELAAFTKN--QKDPGV 59
Query: 66 LSNALEKKDDNKDKKVNYSEFLSLLGDITIDHH 98
L ++K D N D ++++SEFL+L+G + + H
Sbjct: 60 LDRMMKKLDTNSDGQLDFSEFLNLIGGLAMACH 92
>gi|7657532 S100 calcium-binding protein A6 [Homo sapiens]
Length = 90
Score = 41.2 bits (95), Expect = 2e-04
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Query: 12 MNIPLGEKVMLDIVAMFRQYSGDDGRMDMPGLVNLMKENFPNFLSGCEKSDMDYLSNALE 71
M PL + + L +VA+F +YSG +G L + G + D + ++ +E
Sbjct: 1 MACPLDQAIGL-LVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAE-IARLME 58
Query: 72 KKDDNKDKKVNYSEFLSLLGDITIDHHKIMHG 103
D NKD++VN+ E+++ LG + + +++ + G
Sbjct: 59 DLDRNKDQEVNFQEYVTFLGALALIYNEALKG 90
>gi|5174663 S100 calcium binding protein P [Homo sapiens]
Length = 95
Score = 41.2 bits (95), Expect = 2e-04
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 18 EKVMLDIVAMFRQYSGDDGR---MDMPGLVNLMKENFPNFL-SGCEKSDMDYLSNALEKK 73
E M I+ +F +YSG +G + L LM++ P FL SG +K +D L L+
Sbjct: 5 ETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKL---LKDL 61
Query: 74 DDNKDKKVNYSEFLSLLGDITIDHHK 99
D N D +V++SEF+ + IT HK
Sbjct: 62 DANGDAQVDFSEFIVFVAAITSACHK 87
>gi|4506773 S100 calcium-binding protein A9 [Homo sapiens]
Length = 114
Score = 40.4 bits (93), Expect = 3e-04
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 18 EKVMLDIVAMFRQYS---GDDGRMDMPGLVNLMKENFPNFLSGCEKSDMDYLSNALEKKD 74
E+ + I+ F QYS G ++ L++++ NFL K++ + + +E D
Sbjct: 9 ERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEK-VIEHIMEDLD 67
Query: 75 DNKDKKVNYSEFLSLLGDITIDHHKIMH 102
N DK++++ EF+ L+ +T H+ MH
Sbjct: 68 TNADKQLSFEEFIMLMARLTWASHEKMH 95
>gi|4506761 S100 calcium binding protein A10 [Homo sapiens]
Length = 97
Score = 40.4 bits (93), Expect = 3e-04
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 18 EKVMLDIVAMFRQYSGDDGRMDMPGLVNLMKENFPNFLSGCEKSDMDYLSNALEKKDDNK 77
E M ++ F +++GD G + L LM++ FP FL + D + ++ D +
Sbjct: 6 EHAMETMMFTFHKFAGDKGYLTKEDLRVLMEKEFPGFLE--NQKDPLAVDKIMKDLDQCR 63
Query: 78 DKKVNYSEFLSLLGDITI 95
D KV + F SL+ +TI
Sbjct: 64 DGKVGFQSFFSLIAGLTI 81
>gi|5454034 S100 calcium-binding protein, beta [Homo sapiens]
Length = 92
Score = 38.5 bits (88), Expect = 0.001
Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 18 EKVMLDIVAMFRQYSGDDG---RMDMPGLVNLMKENFPNFLSGCEKSDMDYLSNALEKKD 74
EK M+ ++ +F QYSG +G ++ L L+ +FL E + + + +E D
Sbjct: 5 EKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLE--EIKEQEVVDKVMETLD 62
Query: 75 DNKDKKVNYSEFLSLLGDITIDHHK 99
++ D + ++ EF++ + +T H+
Sbjct: 63 NDGDGECDFQEFMAFVAMVTTACHE 87
>gi|5174661 S100 calcium binding protein A2 [Homo sapiens]
Length = 97
Score = 38.1 bits (87), Expect = 0.002
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 18 EKVMLDIVAMFRQYS---GDDGRMDMPGLVNLMKENFPNFLSGCEKSDMDYLSNALEKKD 74
E+ + +V F +YS GD ++ + L+ + P+F+ EK D + L + D
Sbjct: 6 EQALAVLVTTFHKYSCQEGDKFKLSKGEMKELLHKELPSFVG--EKVDEEGLKKLMGSLD 63
Query: 75 DNKDKKVNYSEFLSLLGDITI 95
+N D++V++ E+ L IT+
Sbjct: 64 ENSDQQVDFQEYAVFLALITV 84
>gi|122937510 sentan, cilia apical structure protein [Homo sapiens]
Length = 147
Score = 38.1 bits (87), Expect = 0.002
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 18 EKVMLDIVAMFRQYSGDDGRMDMPGLVNLMKENFPNFLSGCEKSDMDYLSNALEKKDDNK 77
EK + +FR S DG+++ +L++ F NF G E L + D++
Sbjct: 57 EKAIATTALIFRNSSDSDGKLEKAIAKDLLQTQFRNFAEGQETKPK--YREILSELDEHT 114
Query: 78 DKKVNYSEFLSLLGDITI 95
+ K+++ +F+ LL IT+
Sbjct: 115 ENKLDFEDFMILLLSITV 132
>gi|5454032 S100 calcium binding protein A1 [Homo sapiens]
Length = 94
Score = 36.6 bits (83), Expect = 0.004
Identities = 19/81 (23%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 18 EKVMLDIVAMFRQYSGDDG---RMDMPGLVNLMKENFPNFLSGCEKSDMDYLSNALEKKD 74
E M ++ +F +SG +G ++ L L++ FL + D+D + +++ D
Sbjct: 6 ETAMETLINVFHAHSGKEGDKYKLSKKELKELLQTELSGFLDA--QKDVDAVDKVMKELD 63
Query: 75 DNKDKKVNYSEFLSLLGDITI 95
+N D +V++ E++ L+ +T+
Sbjct: 64 ENGDGEVDFQEYVVLVAALTV 84
>gi|150010678 S100 calcium binding protein Z [Homo sapiens]
Length = 99
Score = 35.0 bits (79), Expect = 0.013
Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 18 EKVMLDIVAMFRQYSGDDGR---MDMPGLVNLMKENFPNFLSGCEKSDMDYLSNALEKKD 74
E M ++ +F +YSG + + + L L++ FLS C+K + + ++ D
Sbjct: 6 EMAMDTMIRIFHRYSGKERKRFKLSKGELKLLLQRELTEFLS-CQK-ETQLVDKIVQDLD 63
Query: 75 DNKDKKVNYSEFLSLLGDITI 95
NKD +V+++EF+ ++ +T+
Sbjct: 64 ANKDNEVDFNEFVVMVAALTV 84
>gi|4506767 S100 calcium binding protein A5 [Homo sapiens]
Length = 110
Score = 35.0 bits (79), Expect = 0.013
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 8 LKAKMNIPLGEKVMLDIVAMFRQYSGDDGR---MDMPGLVNLMKENFPNFLSGCEKSDMD 64
L M PL EK + +V F +YSG +G + L L+K+ L ++S +D
Sbjct: 15 LHTVMETPL-EKALTTMVTTFHKYSGREGSKLTLSRKELKELIKKEL--CLGEMKESSID 71
Query: 65 YLSNALEKKDDNKDKKVNYSEFLSLL 90
L +L+K D + YS FL++L
Sbjct: 72 DLMKSLDKNSDQEIDFKEYSVFLTML 97
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 31.2 bits (69), Expect = 0.19
Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 21 MLDIVAMFRQYSGDDGRMDMPG---LVNLMKENFPNFLSGCEKSDMDYLSNALEKKDDNK 77
++ ++ +F QY+ G D L L++ F L +D D + L+ D +
Sbjct: 8 VITVIDVFYQYATQHGEYDTLNKAELKELLENEFHQILKN--PNDPDTVDIILQSLDRDH 65
Query: 78 DKKVNYSEFLSLLGDITIDHHKIM 101
+KKV+++E+L ++ + +KI+
Sbjct: 66 NKKVDFTEYLLMIFKLVQARNKII 89
>gi|20149675 EF-hand domain family, member D2 [Homo sapiens]
Length = 240
Score = 31.2 bits (69), Expect = 0.19
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 8/70 (11%)
Query: 19 KVMLDIVAMFRQY-SGDDGRMDMPGLVNLMKENFPNFLSGCEKSDMDYLSNALEKKDDNK 77
K + D+ MF+QY +G DG +D+ L +M++ G ++ + L N +++ D++
Sbjct: 92 KQIKDMEKMFKQYDAGRDGFIDLMELKLMMEK------LGAPQTHLG-LKNMIKEVDEDF 144
Query: 78 DKKVNYSEFL 87
D K+++ EFL
Sbjct: 145 DSKLSFREFL 154
>gi|5032059 S100 calcium-binding protein A12 [Homo sapiens]
Length = 92
Score = 30.8 bits (68), Expect = 0.24
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 18 EKVMLDIVAMFRQYSGDDGRMDMPG---LVNLMKENFPNFLSGCEKSDMDYLSNALEKKD 74
E+ + IV +F QYS G D L L+ + N + + D + + D
Sbjct: 5 EEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIK--DKAVIDEIFQGLD 62
Query: 75 DNKDKKVNYSEFLSLL 90
N+D++V++ EF+SL+
Sbjct: 63 ANQDEQVDFQEFISLV 78
>gi|60097902 filaggrin [Homo sapiens]
Length = 4061
Score = 30.4 bits (67), Expect = 0.32
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 24 IVAMFRQYSGDDGRMDMPG---LVNLMKENFPNFLSGCEKSDMDYLSNALEKKDDNKDKK 80
I+ +F+QYS D D L L+++ F L + DM + ++ D + +KK
Sbjct: 11 IINLFKQYSKKDKNTDTLSKKELKELLEKEFRQILKNPDDPDM--VDVFMDHLDIDHNKK 68
Query: 81 VNYSEFLSLL 90
++++EFL ++
Sbjct: 69 IDFTEFLLMV 78
>gi|120587023 down-regulated in metastasis [Homo sapiens]
Length = 2785
Score = 29.3 bits (64), Expect = 0.71
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 7 FLKAKMNIPLGEKVMLDIVAMFRQ--YSGDDGRMDMPGLVNLMKENFPNFLSGCEKSDMD 64
FLK ++ PLG+K+ ++ M Q Y + GR ++ + + FP L E M
Sbjct: 2268 FLKYILDYPLGDKLRPNLEFMLAQLNYEHETGRESTLEMIAYLFDTFPQGLLH-ENCGMF 2326
Query: 65 YLSNALEKKDDNKD--KKVNYSEFLSLLGDITID 96
++ L +D+ KK+ SLLG I+++
Sbjct: 2327 FIPLCLMTINDDSATCKKMASMTIKSLLGKISLE 2360
>gi|89036565 PREDICTED: similar to Temporarily Assigned Gene name
family member (tag-184) [Homo sapiens]
Length = 2785
Score = 29.3 bits (64), Expect = 0.71
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 7 FLKAKMNIPLGEKVMLDIVAMFRQ--YSGDDGRMDMPGLVNLMKENFPNFLSGCEKSDMD 64
FLK ++ PLG+K+ ++ M Q Y + GR ++ + + FP L E M
Sbjct: 2268 FLKYILDYPLGDKLRPNLEFMLAQLNYEHETGRESTLEMIAYLFDTFPQGLLH-ENCGMF 2326
Query: 65 YLSNALEKKDDNKD--KKVNYSEFLSLLGDITID 96
++ L +D+ KK+ SLLG I+++
Sbjct: 2327 FIPLCLMTINDDSATCKKMASMTIKSLLGKISLE 2360
>gi|66737374 S100 calcium binding protein A13 [Homo sapiens]
Length = 98
Score = 29.3 bits (64), Expect = 0.71
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 18 EKVMLDIVAMFRQYSGDDGRMDMPGL---VNLMKENFPNFLSGCEKSDMDYLSNALEKKD 74
E+ + +V F ++ +GR D + L+ + P+ L D+ L ++ D
Sbjct: 10 EESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLK-----DVGSLDEKMKSLD 64
Query: 75 DNKDKKVNYSEFLSLLGDITIDHHK 99
N+D ++ ++E+ L+G++ + K
Sbjct: 65 VNQDSELKFNEYWRLIGELAKEIRK 89
>gi|66737372 S100 calcium binding protein A13 [Homo sapiens]
Length = 98
Score = 29.3 bits (64), Expect = 0.71
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 18 EKVMLDIVAMFRQYSGDDGRMDMPGL---VNLMKENFPNFLSGCEKSDMDYLSNALEKKD 74
E+ + +V F ++ +GR D + L+ + P+ L D+ L ++ D
Sbjct: 10 EESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLK-----DVGSLDEKMKSLD 64
Query: 75 DNKDKKVNYSEFLSLLGDITIDHHK 99
N+D ++ ++E+ L+G++ + K
Sbjct: 65 VNQDSELKFNEYWRLIGELAKEIRK 89
>gi|66737370 S100 calcium binding protein A13 [Homo sapiens]
Length = 98
Score = 29.3 bits (64), Expect = 0.71
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 18 EKVMLDIVAMFRQYSGDDGRMDMPGL---VNLMKENFPNFLSGCEKSDMDYLSNALEKKD 74
E+ + +V F ++ +GR D + L+ + P+ L D+ L ++ D
Sbjct: 10 EESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLK-----DVGSLDEKMKSLD 64
Query: 75 DNKDKKVNYSEFLSLLGDITIDHHK 99
N+D ++ ++E+ L+G++ + K
Sbjct: 65 VNQDSELKFNEYWRLIGELAKEIRK 89
>gi|66737368 S100 calcium binding protein A13 [Homo sapiens]
Length = 98
Score = 29.3 bits (64), Expect = 0.71
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 18 EKVMLDIVAMFRQYSGDDGRMDMPGL---VNLMKENFPNFLSGCEKSDMDYLSNALEKKD 74
E+ + +V F ++ +GR D + L+ + P+ L D+ L ++ D
Sbjct: 10 EESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLK-----DVGSLDEKMKSLD 64
Query: 75 DNKDKKVNYSEFLSLLGDITIDHHK 99
N+D ++ ++E+ L+G++ + K
Sbjct: 65 VNQDSELKFNEYWRLIGELAKEIRK 89
>gi|5174659 S100 calcium binding protein A13 [Homo sapiens]
Length = 98
Score = 29.3 bits (64), Expect = 0.71
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 18 EKVMLDIVAMFRQYSGDDGRMDMPGL---VNLMKENFPNFLSGCEKSDMDYLSNALEKKD 74
E+ + +V F ++ +GR D + L+ + P+ L D+ L ++ D
Sbjct: 10 EESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLK-----DVGSLDEKMKSLD 64
Query: 75 DNKDKKVNYSEFLSLLGDITIDHHK 99
N+D ++ ++E+ L+G++ + K
Sbjct: 65 VNQDSELKFNEYWRLIGELAKEIRK 89
>gi|62122917 filaggrin family member 2 [Homo sapiens]
Length = 2391
Score = 28.9 bits (63), Expect = 0.92
Identities = 15/81 (18%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 21 MLDIVAMFRQYSGDDGRMDMPGLVNLMKENFPNFLSGCEKSDMDYLSNALEKKDDNKDKK 80
++D+ + + G+ G + L L+++ L + D D + + D + D++
Sbjct: 11 VIDVFYKYTKQDGECGTLSKGELKELLEKELHPVLKNPD--DPDTVDVIMHMLDRDHDRR 68
Query: 81 VNYSEFLSLLGDITIDHHKIM 101
++++EFL ++ +T+ +K++
Sbjct: 69 LDFTEFLLMIFKLTMACNKVL 89
>gi|4757898 calbindin 3 [Homo sapiens]
Length = 79
Score = 28.5 bits (62), Expect = 1.2
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 23 DIVAMFRQYS---GDDGRMDMPGLVNLMKENFPNFLSGCEKSDMDYLSNALEKKDDNKDK 79
++ +F +Y+ GD ++ L L++ FP+ L G + L + ++ D N D
Sbjct: 9 ELKRIFEKYAAKEGDPDQLSKDELKLLIQAEFPSLLKG-----PNTLDDLFQELDKNGDG 63
Query: 80 KVNYSEFLSLLGDIT 94
+V++ EF L+ I+
Sbjct: 64 EVSFEEFQVLVKKIS 78
>gi|21614544 S100 calcium-binding protein A8 [Homo sapiens]
Length = 93
Score = 28.1 bits (61), Expect = 1.6
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Query: 18 EKVMLDIVAMFRQYS---GDDGRMDMPGLVNLMKENFPNFLSGCEKSDMDYLSNALEKKD 74
EK + I+ ++ +YS G+ + L L++ P ++ K D L D
Sbjct: 6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETECPQYI---RKKGADVWFKEL---D 59
Query: 75 DNKDKKVNYSEFLSLLGDITIDHHKIMH 102
N D VN+ EFL L+ + + HK H
Sbjct: 60 INTDGAVNFQEFLILVIKMGVAAHKKSH 87
>gi|192447423 frequenin homolog isoform 2 [Homo sapiens]
Length = 172
Score = 27.7 bits (60), Expect = 2.1
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 36 GRMDMPGLVNLMKENFPNFLSGCEKSDMDYLSNALEKKDDNKDKKVNYSEFLSLL 90
G++D G + K+ FP G ++ N D+NKD ++ +SEF+ L
Sbjct: 23 GQLDAAGFQKIYKQFFP---FGDPTKFATFVFNVF---DENKDGRIEFSEFIQAL 71
>gi|17738308 frequenin homolog isoform 1 [Homo sapiens]
Length = 190
Score = 27.7 bits (60), Expect = 2.1
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 36 GRMDMPGLVNLMKENFPNFLSGCEKSDMDYLSNALEKKDDNKDKKVNYSEFLSLL 90
G++D G + K+ FP G ++ N D+NKD ++ +SEF+ L
Sbjct: 41 GQLDAAGFQKIYKQFFP---FGDPTKFATFVFNVF---DENKDGRIEFSEFIQAL 89
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.137 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,224,051
Number of Sequences: 37866
Number of extensions: 159793
Number of successful extensions: 366
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 343
Number of HSP's gapped (non-prelim): 43
length of query: 112
length of database: 18,247,518
effective HSP length: 82
effective length of query: 30
effective length of database: 15,142,506
effective search space: 454275180
effective search space used: 454275180
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.