Guide to the Human Genome
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Name: KCNV2 Sequence: fasta or formatted (545aa) NCBI GI: 19424136
Description:

potassium channel, subfamily V, member 2

Referenced in:

Potassium Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         34           2
 C cysteine            2.4         13           2
 D aspartate           4.0         22           2
 E glutamate           8.3         45           3
 F phenylalanine       5.1         28           2
 G glycine             7.3         40           2
 H histidine           2.0         11           1
 I isoleucine          3.9         21           2
 K lysine              2.8         15           2
 L leucine            11.7         64           3
 M methionine          2.2         12           1
 N asparagine          2.9         16           1
 P proline             3.9         21           2
 Q glutamine           5.0         27           2
 R arginine            8.4         46           3
 S serine              7.0         38           2
 T threonine           5.1         28           2
 V valine              5.7         31           2
 W tryptophan          1.7          9           3
 Y tyrosine            4.4         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium channel, subfamily V, member 2 
KCNB2                 0.285   potassium voltage-gated channel, Shab-related subfam...
KCNB1                 0.283   potassium voltage-gated channel, Shab-related subfami...
KCNS3                 0.279   potassium voltage-gated channel delayed-rectifier pr...
KCNV1                 0.273   potassium channel, subfamily V, member 1 
KCNS1                 0.249   potassium voltage-gated channel delayed-rectifier pr...
KCNS2                 0.244   potassium voltage-gated channel, delayed-rectifier, ...
KCNF1                 0.239   potassium voltage-gated channel, subfamily F, member...
KCNG1                 0.225   potassium voltage-gated channel, subfamily G, member...
KCNG4                 0.221   potassium voltage-gated channel, subfamily G, member...
KCNG2                 0.210   potassium voltage-gated channel, subfamily G, member ...
KCNG3                 0.197   potassium voltage-gated channel, subfamily G, member...
KCNG3                 0.194   potassium voltage-gated channel, subfamily G, member...
KCNC1                 0.174   Shaw-related voltage-gated potassium channel protein ...
KCNC1                 0.174   Shaw-related voltage-gated potassium channel protei...
KCND1                 0.171   potassium voltage-gated channel, Shal-related subfam...
KCNC4                 0.170   Shaw-related voltage-gated potassium channel protein...
KCNC4                 0.170   Shaw-related voltage-gated potassium channel protein...
KCNC4                 0.170   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.169   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.169   Shaw-related voltage-gated potassium channel protein...
KCNC2                 0.169   Shaw-related voltage-gated potassium channel protein...
KCND2                 0.166   potassium voltage-gated channel, Shal-related subfami...
KCND3                 0.166   potassium voltage-gated channel, Shal-related subfam...
KCND3                 0.166   potassium voltage-gated channel, Shal-related subfam...
KCNA4                 0.158   potassium voltage-gated channel, shaker-related subfa...
KCNA5                 0.156   potassium voltage-gated channel, shaker-related subf...
KCNA1                 0.156   potassium voltage-gated channel subfamily A member ...
KCNA7                 0.155   potassium voltage-gated channel, shaker-related subf...
KCNA3                 0.153   potassium voltage-gated channel, shaker-related subf...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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