LOC339047 10753

Name: LOC339047	Sequence: fasta or formatted (369aa)		NCBI GI: 193290184
Description: hypothetical protein LOC339047		Referenced in: Nucleus and Nucleolus
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 21 2 C cysteine 3.8 14 2 D aspartate 4.6 17 2 E glutamate 6.0 22 2 F phenylalanine 2.4 9 1 G glycine 3.8 14 2 H histidine 3.5 13 1 I isoleucine 4.3 16 2 K lysine 7.0 26 1 L leucine 10.3 38 2 M methionine 2.4 9 1 N asparagine 3.8 14 1 P proline 9.5 35 4 Q glutamine 3.3 12 2 R arginine 7.6 28 3 S serine 7.3 27 2 T threonine 6.5 24 2 V valine 3.8 14 1 W tryptophan 1.6 6 1 Y tyrosine 2.7 10 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC339047 NPIP 0.858 nuclear pore complex interacting protein LOC729978 0.678 PREDICTED: NPIP-like protein 2 isoform 2 LOC729602 0.652 PREDICTED: NPIP-like protein ENSP00000283050 isofor... LOC728734 0.603 PREDICTED: similar to NPIP-like protein ENSP0000028... NPIPL1 0.591 PREDICTED: nuclear pore complex interacting protein... LOC100132247 0.578 hypothetical protein LOC100132247 NPIPL3 0.578 nuclear pore complex interacting protein-like 3 [Ho... LOC728888 0.565 PREDICTED: similar to acyl-CoA synthetase medium-ch... LOC100288332 0.493 PREDICTED: hypothetical protein XP_002343465 LOC642799 0.482 PREDICTED: similar to GPS, PLAT and transmembrane d... LOC642778 0.482 PREDICTED: similar to GPS, PLAT and transmembrane d... LOC728741 0.475 PREDICTED: hypothetical protein LOC100289169 0.238 PREDICTED: hypothetical protein XP_002343477 NPIPL2 0.232 PREDICTED: nuclear pore complex interacting protein... LOC729602 0.165 PREDICTED: hypothetical protein LOC283846 LOC730153 0.164 PREDICTED: similar to NPIP-like protein ENSP0000034... APBB1IP 0.027 amyloid beta (A4) precursor protein-binding, family ... MLL2 0.027 myeloid/lymphoid or mixed-lineage leukemia 2 WASF3 0.025 WAS protein family, member 3 ZFC3H1 0.024 proline/serine-rich coiled-coil 2 MUC7 0.023 mucin 7, secreted precursor FLJ22184 0.023 PREDICTED: hypothetical protein FLJ22184 MUC7 0.023 mucin 7, secreted precursor MUC7 0.023 mucin 7, secreted precursor BCORL1 0.023 BCL6 co-repressor-like 1 OGFR 0.023 opioid growth factor receptor NACA 0.021 nascent polypeptide-associated complex alpha subuni... MUC2 0.021 mucin 2 precursor LOC100133756 0.021 PREDICTED: hypothetical protein, partial Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.