Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: SERPINA1 Sequence: fasta or formatted (418aa) NCBI GI: 189163530
Description:

serine proteinase inhibitor, clade A, member 1

Referenced in:

Protease Inhibitors

Other entries for this name:
alt mRNA [418aa] serine proteinase inhibitor, clade A, member 1
alt mRNA [418aa] serine proteinase inhibitor, clade A, member 1
alt mRNA [418aa] serine proteinase inhibitor, clade A, member 1
alt mRNA [418aa] serine proteinase inhibitor, clade A, member 1
alt mRNA [418aa] serine proteinase inhibitor, clade A, member 1
alt mRNA [418aa] serine proteinase inhibitor, clade A, member 1
alt mRNA [418aa] serine proteinase inhibitor, clade A, member 1
alt mRNA [418aa] serine proteinase inhibitor, clade A, member 1
alt mRNA [418aa] serine proteinase inhibitor, clade A, member 1
alt mRNA [418aa] serine proteinase inhibitor, clade A, member 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         26           2
 C cysteine            0.7          3           2
 D aspartate           5.7         24           1
 E glutamate           7.7         32           3
 F phenylalanine       6.5         27           2
 G glycine             5.7         24           1
 H histidine           3.1         13           2
 I isoleucine          4.8         20           2
 K lysine              8.1         34           2
 L leucine            12.2         51           3
 M methionine          2.4         10           2
 N asparagine          4.5         19           1
 P proline             4.5         19           2
 Q glutamine           4.3         18           1
 R arginine            1.7          7           2
 S serine              6.0         25           2
 T threonine           7.2         30           2
 V valine              6.5         27           2
 W tryptophan          0.7          3           1
 Y tyrosine            1.4          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   serine proteinase inhibitor, clade A, member 1 [Hom... 
SERPINA1              1.000   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              1.000   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              1.000   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              1.000   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              1.000   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              1.000   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              1.000   serine proteinase inhibitor, clade A, member 1 [Hom...
SERPINA1              1.000   serine proteinase inhibitor, clade A, member 1 [Homo...
SERPINA1              1.000   serine proteinase inhibitor, clade A, member 1 [Homo...
SERPINA1              1.000   serine proteinase inhibitor, clade A, member 1 [Homo...
SERPINA3              0.375   serpin peptidase inhibitor, clade A, member 3 precur...
SERPINA4              0.363   serine (or cysteine) proteinase inhibitor, clade A (...
SERPINA6              0.361   corticosteroid binding globulin precursor 
SERPINA5              0.357   serine (or cysteine) proteinase inhibitor, clade A ...
SERPINA11             0.356   serpin peptidase inhibitor, clade A (alpha-1 antipr...
SERPINA12             0.347   serine (or cysteine) proteinase inhibitor, clade A (...
SERPINA7              0.346   serine (or cysteine) proteinase inhibitor, clade A,...
SERPINA9              0.331   serine (or cysteine) proteinase inhibitor, clade A ...
SERPINA10             0.232   serine (or cysteine) proteinase inhibitor, clade A ...
SERPINA10             0.232   serine (or cysteine) proteinase inhibitor, clade A (a...
SERPINB4              0.221   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB3              0.218   serine (or cysteine) proteinase inhibitor, clade B (o...
SERPINB9              0.213   serpin peptidase inhibitor, clade B, member 9 
SERPINB11             0.208   serpin peptidase inhibitor, clade B, member 11 [Hom...
SERPINB10             0.199   serine (or cysteine) proteinase inhibitor, clade B (o...
SERPINB6              0.197   serine (or cysteine) proteinase inhibitor, clade B (...
SERPIND1              0.195   heparin cofactor II precursor 
SERPINB12             0.190   serine (or cysteine) proteinase inhibitor, clade B (...
SERPINB8              0.188   serine (or cysteine) proteinase inhibitor, clade B (...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press