Guide to the Human Genome
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Name: CDCA7L Sequence: fasta or formatted (408aa) NCBI GI: 188497637
Description:

cell division cycle associated 7-like isoform 3

Referenced in:

Myc and Related Functions

Other entries for this name:
alt prot [420aa] cell division cycle associated 7-like isoform 2
alt prot [454aa] cell division cycle associated 7-like isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         23           2
 C cysteine            3.9         16           2
 D aspartate           7.6         31           2
 E glutamate          10.0         41           4
 F phenylalanine       4.4         18           2
 G glycine             4.2         17           2
 H histidine           0.7          3           1
 I isoleucine          3.9         16           1
 K lysine              7.1         29           2
 L leucine             6.6         27           2
 M methionine          1.5          6           1
 N asparagine          3.9         16           1
 P proline             4.2         17           2
 Q glutamine           3.7         15           1
 R arginine           10.3         42           3
 S serine              9.6         39           3
 T threonine           5.1         21           1
 V valine              5.1         21           2
 W tryptophan          0.2          1           1
 Y tyrosine            2.2          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cell division cycle associated 7-like isoform 3 [Ho... 
CDCA7L                0.972   cell division cycle associated 7-like isoform 1 [Hom...
CDCA7L                0.887   cell division cycle associated 7-like isoform 2 [Ho...
CDCA7                 0.335   cell division cycle associated 7 isoform 1 
CDCA7                 0.320   cell division cycle associated 7 isoform 2 
AP3B1                 0.038   adaptor-related protein complex 3, beta 1 subunit [H...
DSPP                  0.020   dentin sialophosphoprotein preproprotein 
ZC3H18                0.019   zinc finger CCCH-type containing 18 
ATRX                  0.019   transcriptional regulator ATRX isoform 2 
ATRX                  0.019   transcriptional regulator ATRX isoform 1 
MYST4                 0.018   MYST histone acetyltransferase (monocytic leukemia)...
CHD1                  0.018   chromodomain helicase DNA binding protein 1 
PHACTR2               0.018   phosphatase and actin regulator 2 isoform 4 
PHACTR2               0.018   phosphatase and actin regulator 2 isoform 3 
PHACTR2               0.018   phosphatase and actin regulator 2 isoform 2 
PHACTR2               0.018   phosphatase and actin regulator 2 isoform 1 
AKAP12                0.018   A kinase (PRKA) anchor protein 12 isoform 1 
AKAP12                0.018   A kinase (PRKA) anchor protein 12 isoform 2 
MAP9                  0.018   aster-associated protein 
SUDS3                 0.016   suppressor of defective silencing 3 
NCOR1                 0.016   nuclear receptor co-repressor 1 
DMP1                  0.016   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.016   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
NOLC1                 0.015   nucleolar and coiled-body phosphoprotein 1 
NEUROD1               0.015   neurogenic differentiation 1 
CYLC1                 0.015   cylicin, basic protein of sperm head cytoskeleton 1...
NUF2                  0.015   NUF2, NDC80 kinetochore complex component 
NUF2                  0.015   NUF2, NDC80 kinetochore complex component 
PPIG                  0.015   peptidylprolyl isomerase G 
CRYBG3                0.015   beta-gamma crystallin domain containing 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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