Name: CALR3 | Sequence: fasta or formatted (384aa) | NCBI GI: 187608348 | |
Description: calreticulin 3
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Referenced in: ER, Golgi, and the Secretory Pathway
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 4.7 18 1 C cysteine 1.0 4 1 D aspartate 7.8 30 2 E glutamate 8.1 31 6 F phenylalanine 5.2 20 1 G glycine 7.0 27 3 H histidine 3.6 14 1 I isoleucine 5.5 21 1 K lysine 9.9 38 2 L leucine 8.1 31 2 M methionine 2.1 8 1 N asparagine 4.7 18 1 P proline 2.9 11 2 Q glutamine 4.9 19 1 R arginine 4.4 17 2 S serine 5.2 20 2 T threonine 4.7 18 2 V valine 3.1 12 1 W tryptophan 2.9 11 1 Y tyrosine 4.2 16 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 calreticulin 3 CALR 0.469 calreticulin precursor CLGN 0.157 calmegin CLGN 0.157 calmegin CANX 0.152 calnexin precursor CANX 0.152 calnexin precursor CCDC46 0.011 coiled-coil domain containing 46 isoform a TDO2 0.010 tryptophan 2,3-dioxygenase NR1D2 0.008 nuclear receptor subfamily 1, group D, member 2 iso... ZCCHC7 0.008 zinc finger, CCHC domain containing 7 NR1D2 0.008 nuclear receptor subfamily 1, group D, member 2 iso... EVI1 0.008 ecotropic viral integration site 1 isoform a EVI1 0.008 ecotropic viral integration site 1 isoform b EVI1 0.008 ecotropic viral integration site 1 isoform b PIBF1 0.008 progesterone-induced blocking factor 1 LEPREL2 0.006 leprecan-like 2 SPTY2D1 0.006 SPT2, Suppressor of Ty, domain containing 1 HNRNPU 0.006 heterogeneous nuclear ribonucleoprotein U isoform b ... HNRNPU 0.006 heterogeneous nuclear ribonucleoprotein U isoform a ... ZNF155 0.006 zinc finger protein 155 ZNF155 0.006 zinc finger protein 155 SLC24A1 0.006 solute carrier family 24 (sodium/potassium/calcium ex... RPGR 0.006 retinitis pigmentosa GTPase regulator isoform C [Hom... PODXL2 0.006 podocalyxin-like 2 DENND2A 0.006 DENN/MADD domain containing 2A PPP1R12A 0.005 protein phosphatase 1, regulatory (inhibitor) subun... PPP1R12A 0.005 protein phosphatase 1, regulatory (inhibitor) subun... PPP1R12A 0.005 protein phosphatase 1, regulatory (inhibitor) subunit... LEPR 0.005 leptin receptor isoform 3 LEPR 0.005 leptin receptor isoform 2Human BLASTP results (used to prepare the table) |
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.