Guide to the Human Genome
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Name: XKR3 Sequence: fasta or formatted (459aa) NCBI GI: 103471991
Description:

X Kell blood group precursor-related family, member 3

Referenced in:

Hematopoiesis and Erythrocytes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         21           2
 C cysteine            2.2         10           2
 D aspartate           2.4         11           2
 E glutamate           5.2         24           2
 F phenylalanine       7.4         34           2
 G glycine             4.4         20           2
 H histidine           1.7          8           1
 I isoleucine          9.2         42           2
 K lysine              5.4         25           1
 L leucine            13.1         60           3
 M methionine          3.5         16           1
 N asparagine          5.0         23           2
 P proline             2.8         13           2
 Q glutamine           3.9         18           2
 R arginine            4.8         22           2
 S serine              7.4         34           3
 T threonine           4.8         22           2
 V valine              5.9         27           2
 W tryptophan          2.2         10           1
 Y tyrosine            4.1         19           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   X Kell blood group precursor-related family, member... 
LOC100289232          0.553   PREDICTED: hypothetical protein XP_002343935 
XKRX                  0.444   XK, Kell blood group complex subunit-related, X-lin...
XK                    0.281   membrane transport protein XK 
XKRY                  0.097   XK, Kell blood group complex subunit-related, Y-link...
XKRY2                 0.097   XK, Kell blood group complex subunit-related, Y-link...
XKR6                  0.029   XK, Kell blood group complex subunit-related family,...
XKR4                  0.028   XK, Kell blood group complex subunit-related family,...
XKR5                  0.019   XK-related protein 5a 
XKR7                  0.016   XK, Kell blood group complex subunit-related family,...
XKR9                  0.016   XK, Kell blood group complex subunit-related family,...
TAS2R41               0.009   taste receptor, type 2, member 41 
GPR155                0.006   G protein-coupled receptor 155 isoform 9 
GPR155                0.006   G protein-coupled receptor 155 isoform 10 
ANGPT2                0.006   angiopoietin 2 isoform c precursor 
ANGPT2                0.006   angiopoietin 2 isoform b precursor 
ANGPT2                0.006   angiopoietin 2 isoform a precursor 
SLC12A4               0.006   solute carrier family 12, member 4 isoform e 
SLC12A4               0.006   solute carrier family 12, member 4 isoform d 
SLC12A4               0.006   solute carrier family 12, member 4 isoform c 
SLC12A4               0.006   solute carrier family 12, member 4 isoform b 
SLC12A4               0.006   solute carrier family 12, member 4 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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