Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: SUSD2 Sequence: fasta or formatted (822aa) NCBI GI: 10092665
Description:

sushi domain containing 2

Referenced in:

Additional Interaction Domain Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         63           2
 C cysteine            3.4         28           2
 D aspartate           5.2         43           2
 E glutamate           4.0         33           2
 F phenylalanine       4.3         35           2
 G glycine             8.5         70           2
 H histidine           3.2         26           1
 I isoleucine          1.6         13           2
 K lysine              2.2         18           1
 L leucine            10.3         85           4
 M methionine          1.9         16           2
 N asparagine          3.4         28           2
 P proline             7.1         58           3
 Q glutamine           4.4         36           2
 R arginine            5.0         41           3
 S serine              8.3         68           2
 T threonine           7.7         63           2
 V valine              6.1         50           2
 W tryptophan          2.6         21           1
 Y tyrosine            3.3         27           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sushi domain containing 2 
MUC4                  0.067   mucin 4 isoform a 
MUC4                  0.067   mucin 4 isoform e 
MUC4                  0.067   mucin 4 isoform d 
CSMD1                 0.020   CUB and Sushi multiple domains 1 
CSMD2                 0.020   CUB and Sushi multiple domains 2 
CSMD3                 0.019   CUB and Sushi multiple domains 3 isoform 3 
CSMD3                 0.019   CUB and Sushi multiple domains 3 isoform 2 
CSMD3                 0.019   CUB and Sushi multiple domains 3 isoform 1 
SVEP1                 0.018   polydom 
CD46                  0.018   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.018   CD46 antigen, complement regulatory protein isoform ...
MUC6                  0.018   mucin 6, gastric 
CR1                   0.017   complement receptor 1 isoform S precursor 
CR1                   0.017   complement receptor 1 isoform F precursor 
LOC100133944          0.017   PREDICTED: similar to Fc fragment of IgG binding pr...
LOC100293643          0.016   PREDICTED: similar to Fc fragment of IgG binding pr...
LOC100290309          0.016   PREDICTED: hypothetical protein XP_002348012 
FCGBP                 0.016   Fc fragment of IgG binding protein 
FBLN7                 0.016   fibulin 7 isoform 2 
FBLN7                 0.016   fibulin 7 isoform 1 
TECTA                 0.015   tectorin alpha precursor 
CD46                  0.015   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.015   CD46 antigen, complement regulatory protein isoform ...
CR2                   0.014   complement component (3d/Epstein Barr virus) recepto...
CR2                   0.014   complement component (3d/Epstein Barr virus) recepto...
CD46                  0.014   CD46 antigen, complement regulatory protein isoform ...
CD46                  0.014   CD46 antigen, complement regulatory protein isoform ...
CFB                   0.014   complement factor B preproprotein 
C4BPB                 0.013   complement component 4 binding protein, beta chain i...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press